RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 UGT8Q16880 541 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 LYPLAL1Q5VWZ2 237 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 NOXRED1Q6NXP6 359 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 MARVELD3Q96A59 401 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 CNPPD1Q9BV87 410 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 ZNF556Q9HAH1 456 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 TPT1P8Q9HAU6 139 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 LSM2Q9Y333 95 aaKnown RBP16.75■□□□□ 0.27
CHTOP-203ENST00000368690 SLC25A14O95258 325 aaPredicted RBP16.75■□□□□ 0.27
CHTOP-203ENST00000368690 HMBSP08397 361 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 IFNA8P32881 189 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 HMGCLP35914 325 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 GZMKP49863 264 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 CDH4P55283 916 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 ZMAT1Q5H9K5 638 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 C10orf120Q5SQS8 335 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 C1orf53Q5VUE5 145 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 MEDAGQ5VYS4 303 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 RNLSQ5VYX0 342 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 MACC1Q6ZN28 852 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 SERPINA9Q86WD7 417 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 LAX1Q8IWV1 398 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 LGI4Q8N135 537 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 WDR36Q8NI36 951 aaKnown RBP16.75■□□□□ 0.27
CHTOP-203ENST00000368690 LKAAEAR1Q8TD35 194 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 GPR152Q8TDT2 470 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 UTP15Q8TED0 518 aaKnown RBP16.75■□□□□ 0.27
CHTOP-203ENST00000368690 REPS1Q96D71 796 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 CLIP3Q96DZ5 547 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 APIPQ96GX9 242 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 MSLNLQ96KJ4 702 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 BBS2Q9BXC9 721 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 MCOLN1Q9GZU1 580 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 MMP28Q9H239 520 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 TRIM39Q9HCM9 518 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 LATS2Q9NRM7 1088 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 TBX21Q9UL17 535 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 STUB1Q9UNE7 303 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 FNDC3AQ9Y2H6 1198 aaKnown RBP16.75■□□□□ 0.27
CHTOP-203ENST00000368690 LAMA2P24043 3122 aaKnown RBP16.75■□□□□ 0.27
CHTOP-203ENST00000368690 ALPK3Q96L96 1907 aa16.75■□□□□ 0.27
CHTOP-203ENST00000368690 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.74■□□□□ 0.27
CHTOP-203ENST00000368690 ARRDC5A6NEK1 342 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 TFECO14948 347 aaPredicted RBP16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CYP7B1O75881 506 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CCNB2O95067 398 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 LRATO95237 230 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 C1QCP02747 245 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CBSLP0DN79 551 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 PSMA1P25786 263 aaKnown RBP16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CBSP35520 551 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CREB3L2Q70SY1 520 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 COQ8BQ96D53 544 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 EXOC2Q96KP1 924 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 NIPSNAP1Q9BPW8 284 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 ELAC1Q9H777 363 aaKnown RBP16.74■□□□□ 0.27
CHTOP-203ENST00000368690 FZD3Q9NPG1 666 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 RLIMQ9NVW2 624 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 TAS2R16Q9NYV7 291 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 SH3BP4Q9P0V3 963 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 KLHL42Q9P2K6 505 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 BTNL2Q9UIR0 455 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 FZD4Q9ULV1 537 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 ZNF451Q9Y4E5 1061 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 PDE9AO76083 593 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 C1QBP02746 253 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 OR4Q2P0C623 313 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CSTF2P33240 577 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CA8P35219 290 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CRYBB2P43320 205 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 ARHGEF7Q14155 803 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 EFR3AQ14156 821 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 IFI44LQ53G44 452 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 SDHAF4Q5VUM1 108 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 CLDN22Q8N7P3 220 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 C11orf65Q8NCR3 313 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 BHMTQ93088 406 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 APOLD1Q96LR9 279 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 HTATIP2Q9BUP3 242 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 TOR4AQ9NXH8 423 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 GPSM3Q9Y4H4 160 aa16.74■□□□□ 0.27
CHTOP-203ENST00000368690 SCN8AQ9UQD0 1980 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 HYKKA2RU49 373 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 ZAR1LA6NP61 321 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 SHOXO15266 292 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 INPPL1O15357 1258 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 OAZ2O95190 189 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 CXCL10P02778 98 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 GPR15P49685 360 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 HMGA2P52926 109 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 TP53BP2Q13625 1128 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 LARS2Q15031 903 aaKnown RBP16.73■□□□□ 0.27
CHTOP-203ENST00000368690 QPRTQ15274 297 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 DDX53Q86TM3 631 aaKnown RBP16.73■□□□□ 0.27
CHTOP-203ENST00000368690 SYT12Q8IV01 421 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 SPPL2AQ8TCT8 520 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 FBXO32Q969P5 355 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 ZC3HAV1LQ96H79 300 aaKnown RBP16.73■□□□□ 0.27
CHTOP-203ENST00000368690 SPON2Q9BUD6 331 aa16.73■□□□□ 0.27
CHTOP-203ENST00000368690 C11orf54Q9H0W9 315 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms