RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 BROXQ5VW32 411 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 FAM83HQ6ZRV2 1179 aaPredicted RBP13.43□□□□□ -0.26
USF1-202ENST00000368020 ARMCX6Q7L4S7 300 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 ZNF513Q8N8E2 541 aaPredicted RBP13.43□□□□□ -0.26
USF1-202ENST00000368020 ABHD11Q8NFV4 315 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 TTLQ8NG68 377 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 OR52N2Q8NGI0 321 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 OR5AR1Q8NGP9 310 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 LZICQ8WZA0 190 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 SH3GL3Q99963 347 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 TMEM38AQ9H6F2 299 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 MIEF1Q9NQG6 463 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 TMEM9Q9P0T7 183 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 ICKQ9UPZ9 632 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 SUV39H1O43463 412 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 DNAJB5O75953 348 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 B3GALT4O96024 378 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 TGFB1P01137 390 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 DRD1P21728 446 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 IGFBP5P24593 272 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 GSTM2P28161 218 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SOX9P48436 509 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SGCGQ13326 291 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 TUBA3CQ13748 450 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 ZIK1Q3SY52 487 aaPredicted RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 TMEM196Q5HYL7 178 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 ZNF551Q7Z340 670 aaPredicted RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 SFTPA1Q8IWL2 248 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 ZC3H7AQ8IWR0 971 aaKnown RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 HDDC3Q8N4P3 179 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 MPP4Q96JB8 637 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 REEP1Q9H902 201 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 TAS2R9Q9NYW1 312 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SPASTQ9UBP0 616 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SH2B3Q9UQQ2 575 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 BTBD3Q9Y2F9 522 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 PADI2Q9Y2J8 665 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 COL6A3P12111 3177 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 A0A1B0GTW7 788 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 LOC100130705A0A1B0GUX0 176 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 H3BSA7 217 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 MAN2B1O00754 1011 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 NARSO43776 548 aaKnown RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 NOL3O60936 208 aaKnown RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 TRMUO75648 421 aaKnown RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 CPNE6O95741 557 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 CLIC3O95833 236 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 ETS2P15036 469 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 JUNBP17275 347 aaPredicted RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 CDH15P55291 814 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 TAS2R38P59533 333 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 TAS2R50P59544 299 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 REEP5Q00765 189 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 KCNAB2Q13303 367 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 KEAP1Q14145 624 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 ZNF630Q2M218 657 aaPredicted RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 GCNT6Q5T4J0 391 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 KHDRBS2Q5VWX1 349 aaKnown RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 ADNP2Q6IQ32 1131 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SDE2Q6IQ49 451 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 ANKRD26P1Q6NSI1 321 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SLC9B2Q86UD5 537 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 DCP2Q8IU60 420 aaKnown RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 PIK3C3Q8NEB9 887 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 ZNF347Q96SE7 839 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 MBOAT4Q96T53 435 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 EPYCQ99645 322 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SLC35A5Q9BS91 424 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 DOHHQ9BU89 302 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 NPLQ9BXD5 320 aaPredicted RBP13.42□□□□□ -0.26
USF1-202ENST00000368020 OR51B5Q9H339 312 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SMURF2Q9HAU4 748 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 ADAM29Q9UKF5 820 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 SCML1Q9UN30 329 aa13.42□□□□□ -0.26
USF1-202ENST00000368020 ADAMDEC1O15204 470 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 YY2O15391 372 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 JRKO75564 520 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 KLK1P06870 262 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 ITGA2P17301 1181 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 EEF1B2P24534 225 aaKnown RBP13.41□□□□□ -0.26
USF1-202ENST00000368020 NUP107P57740 925 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 GRSF1Q12849 480 aaKnown RBP eCLIP13.41□□□□□ -0.26
USF1-202ENST00000368020 HEPACAMQ14CZ8 416 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 PLCL1Q15111 1095 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 IRF4Q15306 451 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 ZNF691Q5VV52 312 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 ZNF566Q969W8 418 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 FAM131CQ96AQ9 280 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 DTNBP1Q96EV8 351 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 C1QTNF2Q9BXJ5 285 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 NEUROD4Q9HD90 331 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 WNT16Q9UBV4 365 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 TAC3Q9UHF0 121 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 HCN2Q9UL51 889 aa13.41□□□□□ -0.26
USF1-202ENST00000368020 K7EQS6 105 aa13.4□□□□□ -0.26
USF1-202ENST00000368020 BCKDKO14874 412 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms