RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 YIPF6Q96EC8 236 aa16.77■□□□□ 0.28
TRIM11-202ENST00000366699 VMP1Q96GC9 406 aa16.77■□□□□ 0.28
TRIM11-202ENST00000366699 RUBCNLQ9H714 662 aa16.77■□□□□ 0.28
TRIM11-202ENST00000366699 PI15O43692 258 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 MMP20O60882 483 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 SH3BGRLO75368 114 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 POP7O75817 140 aaKnown RBP16.76■□□□□ 0.27
TRIM11-202ENST00000366699 NUDT7P0C024 238 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 OPRL1P41146 370 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 MAP2K4P45985 399 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 CLCA4Q14CN2 919 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 TMEM52BQ4KMG9 183 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 CATSPEREQ5SY80 951 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 UNC5DQ6UXZ4 953 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 SLCO6A1Q86UG4 719 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 TMCO5AQ8N6Q1 288 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 WDR12Q9GZL7 423 aaKnown RBP16.76■□□□□ 0.27
TRIM11-202ENST00000366699 AASSQ9UDR5 926 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 PIPSLA2A3N6 862 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 MAN1A2O60476 641 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 MT-ND2P03891 347 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 NTRK1P04629 796 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 HLA-EP13747 358 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 EPHA2P29317 976 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 VIPR2P41587 438 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 SERPINB10P48595 397 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 CRYBA2P53672 197 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 ITGADQ13349 1161 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 CAMK1Q14012 370 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 ADNP2Q6IQ32 1131 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 NXPE4Q6UWF7 544 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 CCDC81Q6ZN84 652 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 IGFN1Q86VF2 1251 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 CXorf40AQ8TE69 158 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 S100ZQ8WXG8 99 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 HRASLS5Q96KN8 279 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 ACOT13Q9NPJ3 140 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 DMRT3Q9NQL9 472 aa16.76■□□□□ 0.27
TRIM11-202ENST00000366699 PSMB9P28065 219 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 PIK3CBP42338 1070 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 SELENOWP63302 87 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 TAP2Q03519 686 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 GAB1Q13480 694 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 SMN1Q16637 294 aaKnown RBP16.75■□□□□ 0.27
TRIM11-202ENST00000366699 DGUOKQ16854 277 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.75■□□□□ 0.27
TRIM11-202ENST00000366699 COMMD6Q7Z4G1 85 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 NAGSQ8N159 534 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 MAL2Q969L2 176 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 MYOCQ99972 504 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 GABARAPL3Q9BY60 117 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 C1QTNF3-AMACRE9PGA6 284 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 E9PQ18 207 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 K7ESM1 405 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 PAPLNO95428 1278 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 RRM2P31350 389 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 SLC6A11P48066 632 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 MASP1P48740 699 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 METAP1P53582 386 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 ATP1A4Q13733 1029 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 ADPRMQ3LIE5 342 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 ERN2Q76MJ5 926 aaKnown RBP16.75■□□□□ 0.27
TRIM11-202ENST00000366699 GOT1L1Q8NHS2 421 aaPredicted RBP16.75■□□□□ 0.27
TRIM11-202ENST00000366699 HERVK_113Q902F9 699 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 RAB7BQ96AH8 199 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 RASSF1Q9NS23 344 aa16.75■□□□□ 0.27
TRIM11-202ENST00000366699 PRRC2BQ5JSZ5 2229 aaKnown RBP16.74■□□□□ 0.27
TRIM11-202ENST00000366699 ADAMDEC1O15204 470 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 AQP1P29972 269 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 KRT20P35900 424 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 RPA4Q13156 261 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 CCDC71Q8IV32 467 aaPredicted RBP16.74■□□□□ 0.27
TRIM11-202ENST00000366699 RAD51AP1Q96B01 352 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 PPCDCQ96CD2 204 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 RSPRY1Q96DX4 576 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 MTERF3Q96E29 417 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 ZNF300Q96RE9 604 aaPredicted RBP16.74■□□□□ 0.27
TRIM11-202ENST00000366699 TSC22D4Q9Y3Q8 395 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 PCDHGA12O60330 932 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 WBP4O75554 376 aaKnown RBP16.74■□□□□ 0.27
TRIM11-202ENST00000366699 FADS2O95864 444 aaKnown RBP16.74■□□□□ 0.27
TRIM11-202ENST00000366699 ZNF8P17098 575 aaPredicted RBP16.74■□□□□ 0.27
TRIM11-202ENST00000366699 KELP23276 732 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 IDUAP35475 653 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 DGCR6Q14129 220 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 ZNF234Q14588 700 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 KRT78Q8N1N4 520 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 SPPL2AQ8TCT8 520 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 SUSD6Q92537 303 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 FAM129BQ96TA1 746 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 EPS8L2Q9H6S3 715 aa16.74■□□□□ 0.27
TRIM11-202ENST00000366699 TGFB1P01137 390 aa16.73■□□□□ 0.27
TRIM11-202ENST00000366699 PTX3P26022 381 aaPredicted RBP16.73■□□□□ 0.27
TRIM11-202ENST00000366699 ACADLP28330 430 aa16.73■□□□□ 0.27
TRIM11-202ENST00000366699 GRK3P35626 688 aa16.73■□□□□ 0.27
TRIM11-202ENST00000366699 CRATP43155 626 aa16.73■□□□□ 0.27
TRIM11-202ENST00000366699 RBBP4Q09028 425 aa16.73■□□□□ 0.27
TRIM11-202ENST00000366699 ELOAQ14241 798 aaKnown RBP16.73■□□□□ 0.27
TRIM11-202ENST00000366699 ANGPTL8Q6UXH0 198 aa16.73■□□□□ 0.27
TRIM11-202ENST00000366699 P3H2Q8IVL5 708 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms