RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CACNA1BQ00975 2339 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 DNMBPQ6XZF7 1577 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ABCC3O15438 1527 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CACNA1IQ9P0X4 2223 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 NPHP3Q7Z494 1330 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CFTRP13569 1480 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TRAV18A0A075B6X5 111 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 A0A087X1B8 175 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 IGHV4-28A0A0C4DH34 117 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZCWPW2A0A1B0GU75 182 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TRIM49BA6NDI0 452 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ARPC2O15144 300 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GMFGO60234 142 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NEBLO76041 1014 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LUC7L3O95232 432 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MOCS2O96007 188 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CXCL10P02778 98 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SAGP10523 405 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CD58P19256 250 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PSMA5P28066 241 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 IER3P46695 156 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 FUT6P51993 359 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 BLOC1S1P78537 153 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TNFRSF17Q02223 184 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ARHGAP1Q07960 439 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF155Q12901 538 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ILF2Q12905 390 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GIT2Q14161 759 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 RBM39Q14498 530 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 RBMS2Q15434 407 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CCDC142Q17RM4 750 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NADK2Q4G0N4 442 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CFAP221Q4G0U5 840 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 C10orf25Q5T742 122 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 AGAP6Q5VW22 663 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LYSMD4Q5XG99 296 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SHC4Q6S5L8 630 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 B3GLCTQ6Y288 498 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ASB18Q6ZVZ8 466 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GLCCI1Q86VQ1 547 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 AMIGO1Q86WK6 493 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CDH26Q8IXH8 852 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 DNAJC22Q8N4W6 341 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MAPKAPK5-AS1Q8N8E1 139 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GPR148Q8TDV2 347 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NXPE2Q96DL1 559 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 URM1Q9BTM9 101 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM231Q9H6L2 316 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF701Q9NV72 531 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PILRAQ9UKJ1 303 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NCKAP1Q9Y2A7 1128 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ANGPTL3Q9Y5C1 460 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MKI67P46013 3256 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ABCC5O15440 1437 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 UBE4BO95155 1302 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 FANCD2Q9BXW9 1451 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PTPN23Q9H3S7 1636 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 A0A087WZY1 265 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GSAPA4D1B5 854 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SMCHD1A6NHR9 2005 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 E5RJQ4 531 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 H3BMH7 237 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GCP02774 474 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ATP6V1C1P21283 382 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LHCGRP22888 699 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ELAVL4P26378 380 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PTPN6P29350 595 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CA8P35219 290 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PCYT1AP49585 367 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LIMK2P53671 638 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PITX1P78337 314 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LRRC74AQ0VAA2 488 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 HNRNPDQ14103 355 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NFATC4Q14934 902 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 INAQ16352 499 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PRTGQ2VWP7 1150 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 FAM174BQ3ZCQ3 159 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF841Q6ZN19 808 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 VASH2Q86V25 355 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZDHHC21Q8IVQ6 265 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MUC20Q8N307 709 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 RPL3LQ92901 407 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MARK4Q96L34 752 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NAP1L3Q99457 506 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 C17orf62Q9BQA9 187 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TSPY26PQ9H489 355 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 KRCC1Q9NPI7 259 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 POLE3Q9NRF9 147 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 STUB1Q9UNE7 303 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 KLHDC2Q9Y2U9 406 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PAM16Q9Y3D7 125 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 R4GN57 208 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 HERC2O95714 4834 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PCSK5Q92824 1860 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TRAV24A0A0B4J272 114 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ILVBLA1L0T0 632 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SNURFLB1AK76 121 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 KRT86O43790 486 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 KIF5CO60282 957 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SNX3O60493 162 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms