RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 FAR1Q8WVX9 515 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 HAS2Q92819 552 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 EXT2Q93063 718 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 ESAMQ96AP7 390 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 SMIM10Q96HG1 83 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 UBXN10Q96LJ8 280 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 MAGEB10Q96LZ2 347 aaPredicted RBP12.5□□□□□ -0.41
CLCC1-202ENST00000348264 C16orf45Q96MC5 204 aaPredicted RBP12.5□□□□□ -0.41
CLCC1-202ENST00000348264 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 SLX1AQ9BQ83 275 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 RNF32Q9H0A6 362 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 ZDHHC18Q9NUE0 388 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 DNAJC11Q9NVH1 559 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 ASB1Q9Y576 335 aa12.5□□□□□ -0.41
CLCC1-202ENST00000348264 CROCCQ5TZA2 2017 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 A0A0G2JN53 185 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 URADA6NGE7 173 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 A8MUI8 341 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 TBX6O95947 436 aaPredicted RBP12.49□□□□□ -0.41
CLCC1-202ENST00000348264 CD22P20273 847 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 JAK1P23458 1154 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 HNRNPH1P31943 449 aaKnown RBP12.49□□□□□ -0.41
CLCC1-202ENST00000348264 GGT5P36269 586 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 KCNC1P48547 511 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 OR4D2P58180 307 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 BTG2P78543 158 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 CKAP4Q07065 602 aaKnown RBP12.49□□□□□ -0.41
CLCC1-202ENST00000348264 ELOAQ14241 798 aaKnown RBP12.49□□□□□ -0.41
CLCC1-202ENST00000348264 EXT1Q16394 746 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 UBAP2Q5T6F2 1119 aaKnown RBP12.49□□□□□ -0.41
CLCC1-202ENST00000348264 GRTP1Q5TC63 336 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 HIST2H2BCQ6DN03 193 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 SULT1C3Q6IMI6 304 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 NIPAL1Q6NVV3 410 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 H3F3CQ6NXT2 135 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 RPUSD3Q6P087 351 aaKnown RBP12.49□□□□□ -0.41
CLCC1-202ENST00000348264 FAM180AQ6UWF9 173 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 TMIGD1Q6UXZ0 262 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 VN1R5Q7Z5H4 357 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 CA13Q8N1Q1 262 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 TCAIMQ8N3R3 496 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 GAL3ST3Q96A11 431 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 KIAA1191Q96A73 305 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 LPAR4Q99677 370 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 NPAS2Q99743 824 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 LRRC1Q9BTT6 524 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLCC1-202ENST00000348264 MMP25Q9NPA2 562 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 GPRC5BQ9NZH0 403 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 CD274Q9NZQ7 290 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 COPG2Q9UBF2 871 aa12.49□□□□□ -0.41
CLCC1-202ENST00000348264 IGKV3D-11A0A0A0MRZ8 115 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 OR5H15A6NDH6 313 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 FAM227AF5H4B4 570 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 MAN1A2O60476 641 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 STK16O75716 305 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 LDLRP01130 860 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 RNH1P13489 461 aaKnown RBP12.48□□□□□ -0.41
CLCC1-202ENST00000348264 EPORP19235 508 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 TFEBP19484 476 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 MAOAP21397 527 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 ST13P50502 369 aaKnown RBP12.48□□□□□ -0.41
CLCC1-202ENST00000348264 SLC26A5P58743 744 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 ACTN3Q08043 901 aaPredicted RBP12.48□□□□□ -0.41
CLCC1-202ENST00000348264 NAB1Q13506 487 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 INAQ16352 499 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 PDK4Q16654 411 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 CDKL4Q5MAI5 379 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 ACER2Q5QJU3 275 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 ZNF324BQ6AW86 544 aaPredicted RBP12.48□□□□□ -0.41
CLCC1-202ENST00000348264 QSOX2Q6ZRP7 698 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 CRLF3Q8IUI8 442 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 BEST3Q8N1M1 668 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 KRT78Q8N1N4 520 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 BCORP1Q8N888 145 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 SNX31Q8N9S9 440 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 TTLQ8NG68 377 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 M1APQ8TC57 530 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 CCT6BQ92526 530 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 MS4A6EQ96DS6 147 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 PTCHD1Q96NR3 888 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 RHBGQ9H310 441 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 EHD1Q9H4M9 534 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 ALG9Q9H6U8 611 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 CNOT10Q9H9A5 744 aaKnown RBP12.48□□□□□ -0.41
CLCC1-202ENST00000348264 KCNK13Q9HB14 408 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 IGSF5Q9NSI5 407 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 OLAHQ9NV23 265 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 STMN3Q9NZ72 180 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 PLEKHB1Q9UF11 243 aaPredicted RBP12.48□□□□□ -0.41
CLCC1-202ENST00000348264 TEKT2Q9UIF3 430 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 PTBP2Q9UKA9 531 aaKnown RBP12.48□□□□□ -0.41
CLCC1-202ENST00000348264 RNF112Q9ULX5 631 aa12.48□□□□□ -0.41
CLCC1-202ENST00000348264 CRYBG3Q68DQ2 2970 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 A1L4Q6 167 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 LRIT2A6NDA9 550 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 UBXN8O00124 270 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 PSMD12O00232 456 aaPredicted RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 CLGNO14967 610 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms