RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 IL3P08700 152 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 FURINP09958 794 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 SLC35G6P0C7Q6 338 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 LAMP1P11279 417 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 TYRP1P17643 537 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 TSFMP43897 325 aaKnown RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 ARRB1P49407 418 aaPredicted RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 WNT3P56703 355 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 LIPEQ05469 1076 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 SRSF5Q13243 272 aaKnown RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 HEPACAMQ14CZ8 416 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 C14orf28Q4W4Y0 310 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 FCRL6Q6DN72 434 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 ANKRD26P1Q6NSI1 321 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 MAML2Q8IZL2 1156 aaPredicted RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 OR2L5Q8NG80 312 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 BAHD1Q8TBE0 780 aaPredicted RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 NT5CQ8TCD5 201 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 RSC1A1Q92681 617 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 MS4A6EQ96DS6 147 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 PANX1Q96RD7 426 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 KCTD14Q9BQ13 255 aaPredicted RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 C17orf62Q9BQA9 187 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 MIEF1Q9NQG6 463 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 BTNL2Q9UIR0 455 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 FBXO4Q9UKT5 387 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 POMT2Q9UKY4 750 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 SNX11Q9Y5W9 270 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 TRBV5-3A0A0A0MS03 114 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 RNASET2O00584 256 aaKnown RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 ERI3O43414 337 aaKnown RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 KLHL18O94889 574 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 GSK3BP49841 420 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 ERFP50548 548 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 PLA2G16P53816 162 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 MTPNP58546 118 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 KLC1Q07866 573 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 HYAL2Q12891 473 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 PLK5Q496M5 336 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 RUNDC3AQ59EK9 446 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 UBE3DQ7Z6J8 389 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 LRGUKQ96M69 825 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 ELF4Q99607 663 aaPredicted RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 ZFYVE21Q9BQ24 234 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 INPP5KQ9BT40 448 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 TBCDQ9BTW9 1192 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 TRIM8Q9BZR9 551 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 SLC6A16Q9GZN6 736 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 PCDHAC1Q9H158 963 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 S100A14Q9HCY8 104 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 LHX9Q9NQ69 397 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 UCKL1Q9NWZ5 548 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 STX18Q9P2W9 335 aaKnown RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 ANGPTL2Q9UKU9 493 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 EXO1Q9UQ84 846 aaKnown RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 NEUROG3Q9Y4Z2 214 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 PCDHB14Q9Y5E9 798 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 MDC1Q14676 2089 aaKnown RBP17.79■□□□□ 0.44
PTN-201ENST00000348225 CROCCQ5TZA2 2017 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 NVLO15381 856 aaKnown RBP17.79■□□□□ 0.44
PTN-201ENST00000348225 SCN2BO60939 215 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 CAPZBP47756 277 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 RXRGP48443 463 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 C6orf132Q5T0Z8 1188 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 FBXO42Q6P3S6 717 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 ABHD17CQ6PCB6 329 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 DHFR2Q86XF0 187 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 MSRB3Q8IXL7 192 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 NATD1Q8N6N6 113 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 DTWD2Q8NBA8 298 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 CAMKVQ8NCB2 501 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 RERGQ96A58 199 aaPredicted RBP17.79■□□□□ 0.44
PTN-201ENST00000348225 RSRC1Q96IZ7 334 aaKnown RBP17.79■□□□□ 0.44
PTN-201ENST00000348225 CCDC115Q96NT0 180 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 ECSITQ9BQ95 431 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 THUMPD3Q9BV44 507 aaKnown RBP17.79■□□□□ 0.44
PTN-201ENST00000348225 SEMA6CQ9H3T2 930 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 KLHL31Q9H511 634 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 EVA1BQ9NVM1 165 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 SLC25A37Q9NYZ2 338 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 NKX1-2Q9UD57 310 aaPredicted RBP17.79■□□□□ 0.44
PTN-201ENST00000348225 PILRBQ9UKJ0 227 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 BTBD3Q9Y2F9 522 aa17.79■□□□□ 0.44
PTN-201ENST00000348225 A0A0A6YYD5 115 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 URADA6NGE7 173 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 TBX19O60806 448 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 STATHP02808 62 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 PROS1P07225 676 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 DDCP20711 480 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 HTR1EP28566 365 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 ATXN3P54252 364 aaPredicted RBP17.78■□□□□ 0.44
PTN-201ENST00000348225 MC1RQ01726 317 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 ZFP1Q6P2D0 407 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 RNF44Q7L0R7 432 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 VN1R4Q7Z5H5 301 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 SPATA24Q86W54 205 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 IFNEQ86WN2 208 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 ZNF655Q8N720 491 aaPredicted RBP17.78■□□□□ 0.44
PTN-201ENST00000348225 TMEM105Q8N8V8 129 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 GAL3ST3Q96A11 431 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms