RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MARVELD3Q96A59 401 aa15.28■□□□□ 0.04
HMGA1-202ENST00000347617 C7orf34Q96L11 122 aa15.28■□□□□ 0.04
HMGA1-202ENST00000347617 C19orf43Q9BQ61 176 aa15.28■□□□□ 0.04
HMGA1-202ENST00000347617 SLC46A2Q9BY10 475 aa15.28■□□□□ 0.04
HMGA1-202ENST00000347617 IRF2BPLQ9H1B7 796 aa15.28■□□□□ 0.04
HMGA1-202ENST00000347617 FAM120CQ9NX05 1096 aaKnown RBP15.28■□□□□ 0.04
HMGA1-202ENST00000347617 INSIG1O15503 277 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 TSPAN3O60637 253 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 PDE9AO76083 593 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 CLDN9O95484 217 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 PTHP01270 115 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 GABRB1P18505 474 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 RFX2P48378 723 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 RORCP51449 518 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 RACK1P63244 317 aaKnown RBP15.27■□□□□ 0.04
HMGA1-202ENST00000347617 CYP4F8P98187 520 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 HMGCS1Q01581 520 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 RHAGQ02094 409 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 ZNF33BQ06732 778 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 SNAP47Q5SQN1 464 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 PLPP4Q5VZY2 271 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 PIANPQ8IYJ0 282 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 GDPD1Q8N9F7 314 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 DCAF4L2Q8NA75 395 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 CSGALNACT1Q8TDX6 532 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 ALG14Q96F25 216 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 DHRS9Q9BPW9 319 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 INPP5KQ9BT40 448 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.04
HMGA1-202ENST00000347617 ITM2CQ9NQX7 267 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 ERVK13-1Q9NX77 482 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 SIRT5Q9NXA8 310 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 SEC14L4Q9UDX3 406 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 FKBPLQ9UIM3 349 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 PCDHGA2Q9Y5H1 932 aa15.27■□□□□ 0.04
HMGA1-202ENST00000347617 IQCMA0A1B0GVH7 501 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 A0A1W2PRU2 124 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 SUV39H1O43463 412 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 PAPLNO95428 1278 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 STSP08842 583 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF7P17097 686 aaPredicted RBP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 PRPS1L1P21108 318 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 IL12RB1P42701 662 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 KIR3DL1P43629 444 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 BOP1Q14137 746 aaKnown RBP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 IQCCQ4KMZ1 466 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 ARHGAP15Q53QZ3 475 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 GPR153Q6NV75 609 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 GPR155Q7Z3F1 870 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 SLC44A2Q8IWA5 706 aaPredicted RBP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 CCDC28AQ8IWP9 274 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 C10orf111Q8N326 155 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 SYNPOQ8N3V7 929 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF557Q8N988 423 aaPredicted RBP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 SPERTQ8NA61 448 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 FIBINQ8TAL6 211 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 UBE2FQ969M7 185 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 ZFYVE19Q96K21 471 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 MGLLQ99685 303 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 EGFL8Q99944 293 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 MAPKAP1Q9BPZ7 522 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 TAPBPLQ9BX59 468 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 MKRN2Q9H000 416 aaKnown RBP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 NSUN3Q9H649 340 aaKnown RBP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 RUBCNLQ9H714 662 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 C14orf119Q9NWQ9 140 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 IMPAD1Q9NX62 359 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 CFAP97Q9P2B7 532 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 DUSP12Q9UNI6 340 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 V9GYH0 126 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 LEFTY2O00292 366 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 FFAR3O14843 346 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 GPR42O15529 346 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 OR1I1O60431 355 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 VIPP01282 170 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 C21orf58P58505 322 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 CDC42P60953 191 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 ARF5P84085 180 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 TARDBPQ13148 414 aaKnown RBP eCLIP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 CAMK1Q14012 370 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 TEAD4Q15561 434 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 LYPLAL1Q5VWZ2 237 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 ATCAYQ86WG3 371 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 FAM109AQ8N4B1 249 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 KCNC2Q96PR1 638 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 MCCC1Q96RQ3 725 aaPredicted RBP15.26■□□□□ 0.03
HMGA1-202ENST00000347617 SRRQ9GZT4 340 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 GIMAP4Q9NUV9 329 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 ELOVL2Q9NXB9 296 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF226Q9NYT6 803 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 STUB1Q9UNE7 303 aa15.26■□□□□ 0.03
HMGA1-202ENST00000347617 FADS2P1A8MWK0 482 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 CBX4O00257 560 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 TNFRSF11BO00300 401 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 CTDSP2O14595 271 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 FPGTO14772 594 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 CCL16O15467 120 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 SSX4O60224 188 aa15.25■□□□□ 0.03
HMGA1-202ENST00000347617 LGI1O95970 557 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms