RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 DPEP1P16444 411 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 CELP19835 753 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 HCAR3P49019 387 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 PTH2RP49190 550 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 HYAL2Q12891 473 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 TEX44Q53QW1 395 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 BCL2L15Q5TBC7 163 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ASRGL1Q7L266 308 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 OR7G1Q8NGA0 311 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 GBA3Q9H227 469 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 SMCO4Q9NRQ5 59 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ZNF230Q9UIE0 474 aaPredicted RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 PDHXO00330 501 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 IDSP22304 550 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 SNU13P55769 128 aaKnown RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 SMAD3P84022 425 aaKnown RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 SNTB2Q13425 540 aaKnown RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 SLC25A52Q3SY17 297 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 PRAMEF13Q5VWM6 474 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 CHCHD4Q8N4Q1 142 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 DNAJA3Q96EY1 480 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 LRFN5Q96NI6 719 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 MAPKAP1Q9BPZ7 522 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 POTEKPQ9BYX7 375 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 DHX33Q9H6R0 707 aaKnown RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 FAM230AA0A1W2PPH8 454 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 SLC19A2O60779 497 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ABCB7O75027 752 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 CD53P19397 219 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 CX3CR1P49238 355 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 PSPHP78330 225 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 MVKQ03426 396 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 WDR45BQ5MNZ6 344 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 HIST2H3PS2Q5TEC6 136 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 SIDT2Q8NBJ9 832 aaKnown RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 RCBTB1Q8NDN9 531 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 DNERQ8NFT8 737 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 PROKR1Q8TCW9 393 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 DCUN1D4Q92564 292 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 PNPLA2Q96AD5 504 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ZNF419Q96HQ0 510 aaPredicted RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 ERVK-6Q9BXR3 956 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 DNTTIP1Q9H147 329 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ARPC5O15511 151 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 RAC2P15153 192 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ELK4P28324 431 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 LRRC38Q5VT99 294 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 HACD2Q6Y1H2 254 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 FRS2Q8WU20 508 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 PYURFQ96I23 114 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 SRMSQ9H3Y6 488 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ZCCHC3Q9NUD5 404 aaKnown RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 SLC7A11Q9UPY5 501 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ITSN1Q15811 1721 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 A0A0J9YVX5 310 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 hCG_1807616A0A1W2PRN6 198 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 DUXAA6NLW8 204 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 CDC7O00311 574 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 CD8BP10966 210 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 POU4F2Q12837 409 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 PKP2Q99959 881 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 DPYSL5Q9BPU6 564 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ACTR6Q9GZN1 396 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 REEP4Q9H6H4 257 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ATG4BQ9Y4P1 393 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 DOPEY2Q9Y3R5 2298 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 RAB19A4D1S5 217 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ECI2O75521 394 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 HOXB9P17482 250 aaPredicted RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 PDGFRLQ15198 375 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 TMEM41BQ5BJD5 291 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 LINGO4Q6UY18 593 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 TRIM46Q7Z4K8 759 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 SUMF2Q8NBJ7 301 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 KCNJ9Q92806 393 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 SLAMF9Q96A28 289 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 KIAA1143Q96AT1 154 aaPredicted RBP12.44□□□□□ -0.42
USP47-202ENST00000339865 PSD2Q9BQI7 771 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 OR51I1Q9H343 314 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 RLIMQ9NVW2 624 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ZNF510Q9Y2H8 683 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 ADAM18Q9Y3Q7 739 aa12.44□□□□□ -0.42
USP47-202ENST00000339865 TTC37Q6PGP7 1564 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 HCRTR2O43614 444 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 DIRAS3O95661 229 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 CHRNB2P17787 502 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 NMBRP28336 390 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TAS2R43P59537 309 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 DSTNP60981 165 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 RAB31Q13636 194 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 OR2AP1Q8NGE2 309 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TMEM125Q96AQ2 219 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 MTMR9Q96QG7 549 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ADGRL3Q9HAR2 1447 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 EPHA6Q9UF33 1036 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ZFR2Q9UPR6 939 aaKnown RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 UBFD1O14562 309 aaKnown RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 APODP05090 189 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms