RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 BARD1Q99728 777 aaKnown RBP13.37□□□□□ -0.27
SF1-202ENST00000334944 CXXC1Q9P0U4 656 aaPredicted RBP13.37□□□□□ -0.27
SF1-202ENST00000334944 ELOVL7A1L3X0 281 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 AGAP14A8MT82 685 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 BCKDKO14874 412 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 PER2O15055 1255 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 TSPAN6O43657 245 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 CSF2P04141 144 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 CTSLP07711 333 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 RAP2AP10114 183 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 POLR2CP19387 275 aaPredicted RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 CD22P20273 847 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 GRK3P35626 688 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 BDKRB1P46663 353 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 MRPL19P49406 292 aaKnown RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 C19orf57Q0VDD7 668 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 SNTA1Q13424 505 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 ZMAT1Q5H9K5 638 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 LYPLAL1Q5VWZ2 237 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 LILRA6Q6PI73 481 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 PAMR1Q6UXH9 720 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 AMIGO1Q86WK6 493 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 SLC47A1Q96FL8 570 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 DPH2Q9BQC3 489 aaPredicted RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 CDADC1Q9BWV3 514 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 UCK2Q9BZX2 261 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 FAM83DQ9H4H8 585 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 TRPS1Q9UHF7 1281 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 SAGE2PA6NJ88 616 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 ZNF682O95780 498 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 GBAP04062 536 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 CSNK1DP48730 415 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 DEFA1P59665 94 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 DEFA3P59666 94 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 CYP4F2P78329 520 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 DOK6Q6PKX4 331 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 PAPD5Q8NDF8 572 aaKnown RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 IRF7Q92985 503 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 FAM120BQ96EK7 910 aaKnown RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 RNF170Q96K19 258 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 MCCC1Q96RQ3 725 aaPredicted RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 LYSMD1Q96S90 227 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 SERHLQ9NQF3 203 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 KLHL20Q9Y2M5 609 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 E7EQ34 232 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 H3BQ06 376 aaPredicted RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 CPSF4O95639 269 aaKnown RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 ADH1AP07327 375 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 UMPSP11172 480 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 PDHA2P29803 388 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 TGFBR2P37173 567 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 SLC9A3P48764 834 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 GABARAPL2P60520 117 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 PON2Q15165 354 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 TCEAL5Q5H9L2 206 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 SLC51BQ86UW2 128 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 CACUL1Q86Y37 369 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 FBXL6Q8N531 539 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 GPR156Q8NFN8 814 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 OR8J3Q8NGG0 315 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 RASSF5Q8WWW0 418 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 TRNT1Q96Q11 434 aaKnown RBP13.36□□□□□ -0.27
SF1-202ENST00000334944 SLC12A9Q9BXP2 914 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 TDP1Q9NUW8 608 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 TBC1D24Q9ULP9 559 aa13.36□□□□□ -0.27
SF1-202ENST00000334944 TSPAN4O14817 238 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 FAM20BO75063 409 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 IL6P05231 212 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 PSKH1P11801 424 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 POU3F3P20264 500 aaPredicted RBP13.35□□□□□ -0.27
SF1-202ENST00000334944 IRF8Q02556 426 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 MVKQ03426 396 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 NAE1Q13564 534 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 RUNDC3AQ59EK9 446 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 XKR6Q5GH73 641 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.35□□□□□ -0.27
SF1-202ENST00000334944 PNCKQ6P2M8 343 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 CLECL1Q8IZS7 167 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 GRPEL2Q8TAA5 225 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 TOX2Q96NM4 488 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 MUC13Q9H3R2 512 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 SLA2Q9H6Q3 261 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 ACOT13Q9NPJ3 140 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.35□□□□□ -0.27
SF1-202ENST00000334944 PLXNB3Q9ULL4 1909 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 MEIOCA2RUB1 952 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 FAM25AB3EWG3 89 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 FAM25CB3EWG5 89 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 FAM25GB3EWG6 89 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 LOC110117498-PIK3R3F6TDL0 507 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 SGTAO43765 313 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 RHOP08100 348 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 MSH3P20585 1137 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 XPAP23025 273 aaPredicted RBP13.35□□□□□ -0.27
SF1-202ENST00000334944 SLC15A1P46059 708 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 TOR2AQ5JU69 321 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 OR4M1Q8NGD0 313 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 CHCHD6Q9BRQ6 235 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 OR51E2Q9H255 320 aa13.35□□□□□ -0.27
SF1-202ENST00000334944 MMP27Q9H306 513 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms