RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 TRIM43Q96BQ3 446 aaPredicted RBP10.31□□□□□ -0.76
CCDC172-201ENST00000333254 PPCDCQ96CD2 204 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 NUS1Q96E22 293 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 SH3YL1Q96HL8 342 aaPredicted RBP10.31□□□□□ -0.76
CCDC172-201ENST00000333254 RHBGQ9H310 441 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 NT5DC2Q9H857 520 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 PELI2Q9HAT8 420 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 GPATCH2Q9NW75 528 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 NDUFAF4Q9P032 175 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 SH3BP4Q9P0V3 963 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 DPP7Q9UHL4 492 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 RWDD3Q9Y3V2 267 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 PCDHGA6Q9Y5G7 932 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 A3GALT2U3KPV4 340 aa10.31□□□□□ -0.76
CCDC172-201ENST00000333254 COL4A3Q01955 1670 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 HIDE1A8MVS5 230 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 RFPL2O75678 378 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 C1QCP02747 245 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 NTRK1P04629 796 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 NUDT7P0C024 238 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 RRM2P31350 389 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 UGT2B10P36537 528 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 BMPR1AP36894 532 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 LIMS1P48059 325 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 MLLT10P55197 1068 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 PIGFQ07326 219 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 PPIGQ13427 754 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC172-201ENST00000333254 SCARB2Q14108 478 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 TBC1D25Q3MII6 688 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 ANKDD1AQ495B1 522 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC172-201ENST00000333254 ADNP2Q6IQ32 1131 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 FAM92BQ6ZTR7 304 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 ERN2Q76MJ5 926 aaKnown RBP10.3□□□□□ -0.76
CCDC172-201ENST00000333254 ARMC8Q8IUR7 673 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 CCDC71Q8IV32 467 aaPredicted RBP10.3□□□□□ -0.76
CCDC172-201ENST00000333254 SLC15A4Q8N697 577 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 ZNF540Q8NDQ6 660 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 CDC26Q8NHZ8 85 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 DYNC2LI1Q8TCX1 351 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 MYDGFQ969H8 173 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 RAD51AP1Q96B01 352 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 RAD9AQ99638 391 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 SLC35A5Q9BS91 424 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 CCDC90BQ9GZT6 254 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 OR52A5Q9H2C5 316 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 RUBCNLQ9H714 662 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 AHSPQ9NZD4 102 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 ANGPT4Q9Y264 503 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 ZNF451Q9Y4E5 1061 aa10.3□□□□□ -0.76
CCDC172-201ENST00000333254 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
CCDC172-201ENST00000333254 TNFRSF11BO00300 401 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 KPNA3O00505 521 aaPredicted RBP10.29□□□□□ -0.76
CCDC172-201ENST00000333254 PCDHGA12O60330 932 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 KLHL18O94889 574 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 UQCRC2P22695 453 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 KELP23276 732 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 MAGEA8P43361 318 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 TUBA1BP68363 451 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 ELAVL3Q14576 367 aaKnown RBP10.29□□□□□ -0.76
CCDC172-201ENST00000333254 NR1D2Q14995 579 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 MICAQ29983 383 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 LRRC26Q2I0M4 334 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 RGS21Q2M5E4 152 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 FBXO43Q4G163 708 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 TOR1AIP1Q5JTV8 583 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 PRAMEF14Q5SWL7 426 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 CATSPEREQ5SY80 951 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 PRAMEF13Q5VWM6 474 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 NIPAL1Q6NVV3 410 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 ADAMTSL4Q6UY14 1074 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 TUBA1AQ71U36 451 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 ZNF605Q86T29 641 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 PDZD3Q86UT5 571 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 FAM129CQ86XR2 697 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 P3H2Q8IVL5 708 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 DCUN1D3Q8IWE4 304 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC172-201ENST00000333254 CFAP206Q8IYR0 622 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 KRT78Q8N1N4 520 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 GPR156Q8NFN8 814 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 OR10G2Q8NGC3 310 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 RHOXF1Q8NHV9 184 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 SPPL3Q8TCT6 385 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 SORCS1Q8WY21 1168 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 RAB7BQ96AH8 199 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 ARRDC3Q96B67 414 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 TAMM41Q96BW9 452 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 COX14Q96I36 57 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 TPD52L3Q96J77 140 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 ZDHHC5Q9C0B5 715 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 PCBD2Q9H0N5 130 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 C11orf49Q9H6J7 331 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 WASH6PQ9NQA3 447 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 EXD2Q9NVH0 621 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 PSORS1C1Q9UIG5 152 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 PCDHGA2Q9Y5H1 932 aa10.29□□□□□ -0.76
CCDC172-201ENST00000333254 M0R3G1 203 aa10.28□□□□□ -0.76
CCDC172-201ENST00000333254 KPNA4O00629 521 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms