RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 GLB1L3Q8NCI6 653 aaPredicted RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 SMPDL3AQ92484 453 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 UBE2FQ969M7 185 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 HSH2DQ96JZ2 352 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 CAMK1GQ96NX5 476 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 EFCAB11Q9BUY7 163 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 C1QTNF7Q9BXJ2 289 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 QRSL1Q9H0R6 528 aaKnown RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 EHD1Q9H4M9 534 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 ABCG2Q9UNQ0 655 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 AQP12BA6NM10 295 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 VEGFDO43915 354 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 PRKNO60260 465 aaPredicted RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 DCDC1P59894 354 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 MYBPC1Q00872 1141 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 LASP1Q14847 261 aaKnown RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 MEP1AQ16819 746 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SLC5A12Q1EHB4 618 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 AMZ1Q400G9 498 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 NADK2Q4G0N4 442 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 GRHL2Q6ISB3 625 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 CEACAM20Q6UY09 585 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 TMEM26Q6ZUK4 368 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 ZNF438Q7Z4V0 828 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 PDZD3Q86UT5 571 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 CLVS1Q8IUQ0 354 aaPredicted RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 AQP12AQ8IXF9 295 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 FBXL6Q8N531 539 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 ZNF555Q8NEP9 628 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 C16orf78Q8WTQ4 265 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 GATA6Q92908 595 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 DNAJA3Q96EY1 480 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 CCDC3Q9BQI4 270 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 PRR14Q9BWN1 585 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 NLNQ9BYT8 704 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 DMRT3Q9NQL9 472 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SMPD3Q9NY59 655 aaPredicted RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 MYRFQ9Y2G1 1151 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SLCO1B1Q9Y6L6 691 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 CCDC88CQ9P219 2028 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 A8MU76 341 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 FAM227AF5H4B4 570 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 J3KTA2 159 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SUV39H1O43463 412 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 FRS3O43559 492 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 XPNPEP2O43895 674 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 ERN1O75460 977 aaKnown RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 TNFAIP8O95379 198 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 ADH1BP00325 375 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 RAP2AP10114 183 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 FMO3P31513 532 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SIM1P81133 766 aaPredicted RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 PROSER1Q86XN7 944 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SLC44A3Q8N4M1 653 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 L3MBTL4Q8NA19 623 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 LINC01555Q8NAE3 123 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SLC9A6Q92581 669 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 PAIP1Q9H074 479 aaKnown RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 OR52A5Q9H2C5 316 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 KAT8Q9H7Z6 458 aaKnown RBP8.64□□□□□ -1.03
COPB2-201ENST00000333188 AHSPQ9NZD4 102 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SLC28A2O43868 658 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 CEACAM5P06731 702 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 CERS1P27544 350 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 BUD31P41223 144 aaPredicted RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 NCBP2P52298 156 aaKnown RBP eCLIP8.63□□□□□ -1.03
COPB2-201ENST00000333188 HOXC5Q00444 222 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 SPIBQ01892 262 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 SRSF11Q05519 484 aaKnown RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 ILF3Q12906 894 aaKnown RBP eCLIP8.63□□□□□ -1.03
COPB2-201ENST00000333188 CSTF3Q12996 717 aaKnown RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 NNATQ16517 81 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 GPAT3Q53EU6 434 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 RUNDC3AQ59EK9 446 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 ZC3H14Q6PJT7 736 aaKnown RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 ANKRD53Q8N9V6 530 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 OR13H1Q8NG92 308 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 RSPH9Q9H1X1 276 aaPredicted RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 KCNH6Q9H252 994 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 TOR3AQ9H497 397 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 POLR1BQ9H9Y6 1135 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 ZCCHC3Q9NUD5 404 aaKnown RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 ST14Q9Y5Y6 855 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 PRSS38A1L453 326 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 CASQ2O14958 399 aaPredicted RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 NPC1O15118 1278 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 SCAMP2O15127 329 aaKnown RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 PAPLNO95428 1278 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 GPIP06744 558 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 C8BP07358 591 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 CHRM5P08912 532 aaPredicted RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 NR2F1P10589 423 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 GGT1P19440 569 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 GSTT1P30711 240 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 KIR2DL1P43626 348 aaPredicted RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 NUDT6P53370 316 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 DBPQ10586 325 aaPredicted RBP8.63□□□□□ -1.03
COPB2-201ENST00000333188 SLAMF1Q13291 335 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 ADAM15Q13444 863 aa8.63□□□□□ -1.03
COPB2-201ENST00000333188 MLF2Q15773 248 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms