RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 C17orf64Q86WR6 236 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 C11orf65Q8NCR3 313 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 SLC35A5Q9BS91 424 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 TEX101Q9BY14 249 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 EBF1Q9UH73 591 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 CDC14AQ9UNH5 594 aa16.67■□□□□ 0.26
DDX28-201ENST00000332395 DNMT3AQ9Y6K1 912 aaPredicted RBP16.67■□□□□ 0.26
DDX28-201ENST00000332395 DOCK8Q8NF50 2099 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 GPR37L1O60883 481 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 MITFO75030 526 aaPredicted RBP16.66■□□□□ 0.26
DDX28-201ENST00000332395 CPNE6O95741 557 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 FPR1P21462 350 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 CRATP43155 626 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 CD47Q08722 323 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 ENPP2Q13822 863 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 TEAD4Q15561 434 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 CTU2Q2VPK5 515 aaKnown RBP16.66■□□□□ 0.26
DDX28-201ENST00000332395 COX20Q5RI15 118 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 C6orf141Q5SZD1 244 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 BROXQ5VW32 411 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 PIWIL3Q7Z3Z3 882 aaKnown RBP16.66■□□□□ 0.26
DDX28-201ENST00000332395 HDDC3Q8N4P3 179 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 ZBTB8BQ8NAP8 495 aaPredicted RBP16.66■□□□□ 0.26
DDX28-201ENST00000332395 MTERF3Q96E29 417 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 SORBS1Q9BX66 1292 aaKnown RBP16.66■□□□□ 0.26
DDX28-201ENST00000332395 SAMHD1Q9Y3Z3 626 aaKnown RBP16.66■□□□□ 0.26
DDX28-201ENST00000332395 OR1A2Q9Y585 309 aa16.66■□□□□ 0.26
DDX28-201ENST00000332395 A0A1W2PP55 124 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 KMOO15229 486 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 SUV39H1O43463 412 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 IL3P08700 152 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 ITGAMP11215 1152 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 STT3AP46977 705 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 CD97P48960 835 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 ITGA1P56199 1179 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 ISL1P61371 349 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 GALNT5Q7Z7M9 940 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 SLC9B2Q86UD5 537 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 PIK3C3Q8NEB9 887 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 MENTQ9BUN1 341 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 LMAN2LQ9H0V9 348 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 WDR26Q9H7D7 661 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 ADPRHL2Q9NX46 363 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 AP1M2Q9Y6Q5 423 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 NUMA1Q14980 2115 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 BCKDKO14874 412 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 ADH1BP00325 375 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 SLC35G4P0C7Q5 338 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 ETFAP13804 333 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 C5AR1P21730 350 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 GDI1P31150 447 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 HSD17B2P37059 387 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 ENTPD1P49961 510 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 DAPP51397 102 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 CASP9P55211 416 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 KCNJ10P78508 379 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 CBX3Q13185 183 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 IL18R1Q13478 541 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 AGERQ15109 404 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 IRF4Q15306 451 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 SHHQ15465 462 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 C2orf27AQ580R0 203 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 KDM4DQ6B0I6 523 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 NUDT18Q6ZVK8 323 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 IKBIPQ70UQ0 350 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 ZNF513Q8N8E2 541 aaPredicted RBP16.65■□□□□ 0.26
DDX28-201ENST00000332395 OR52N2Q8NGI0 321 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 C12orf43Q96C57 262 aaKnown RBP16.65■□□□□ 0.26
DDX28-201ENST00000332395 C7orf34Q96L11 122 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 CDCA3Q99618 268 aaPredicted RBP16.65■□□□□ 0.26
DDX28-201ENST00000332395 PBX4Q9BYU1 374 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 TRIT1Q9H3H1 467 aaKnown RBP16.65■□□□□ 0.26
DDX28-201ENST00000332395 PELI2Q9HAT8 420 aa16.65■□□□□ 0.26
DDX28-201ENST00000332395 CUEDC1Q9NWM3 386 aaPredicted RBP16.65■□□□□ 0.26
DDX28-201ENST00000332395 ABCB7O75027 752 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 TNFRSF21O75509 655 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 GCM2O75603 506 aaPredicted RBP16.64■□□□□ 0.25
DDX28-201ENST00000332395 TBX6O95947 436 aaPredicted RBP16.64■□□□□ 0.25
DDX28-201ENST00000332395 CLCNKAP51800 687 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 SKIV2LQ15477 1246 aaKnown RBP16.64■□□□□ 0.25
DDX28-201ENST00000332395 PRSS53Q2L4Q9 553 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 IQCCQ4KMZ1 466 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 LAIR2Q6ISS4 152 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDX28-201ENST00000332395 ZNF420Q8TAQ5 688 aaPredicted RBP16.64■□□□□ 0.25
DDX28-201ENST00000332395 NRBF2Q96F24 287 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 MYADMQ96S97 322 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 TUBA1CQ9BQE3 449 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 AIF1LQ9BQI0 150 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 RHBGQ9H310 441 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 REEP1Q9H902 201 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 TAS2R9Q9NYW1 312 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 AHSPQ9NZD4 102 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 PDP1Q9P0J1 537 aaPredicted RBP16.64■□□□□ 0.25
DDX28-201ENST00000332395 ACSL6Q9UKU0 697 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 CKAP5Q14008 2032 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 ANKDD1BA6NHY2 528 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 TMEM229AB2RXF0 380 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 GPR89AB7ZAQ6 455 aa16.64■□□□□ 0.25
DDX28-201ENST00000332395 PAK4O96013 591 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms