RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 OR4K17Q8NGC6 315 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 OR5L2Q8NGL0 311 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 OR52J3Q8NH60 311 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 EZH1Q92800 747 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-201ENST00000328300 RNF31Q96EP0 1072 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 HS6ST2Q96MM7 605 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 HOXD1Q9GZZ0 328 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 OR51B5Q9H339 312 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 N6AMT1Q9Y5N5 214 aa11.01□□□□□ -0.65
COL4A5-201ENST00000328300 H6PDO95479 791 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ASGR2P07307 311 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 JUNDP17535 347 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 CEBPBP17676 345 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 PEX2P28328 305 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 RAB15P59190 212 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ARHGAP12Q8IWW6 846 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 PDLIM5Q96HC4 596 aaKnown RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 BMFQ96LC9 184 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 CCDC106Q9BWC9 280 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 GPR174Q9BXC1 333 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 COQ10BQ9H8M1 238 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ZNF726A6NNF4 738 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ZNF99A8MXY4 864 aaPredicted RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 LOC110117498-PIK3R3F6TDL0 507 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 HEXBP07686 556 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 POLR2CP19387 275 aaPredicted RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 SLC6A6P31641 620 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 BMP8BP34820 402 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ALDH3A2P51648 485 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ZNF140P52738 457 aaPredicted RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 GBX2P52951 348 aaPredicted RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 OLIG2Q13516 323 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 GRM7Q14831 915 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 BMP8AQ7Z5Y6 402 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 PLD6Q8N2A8 252 aaKnown RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 GNPDA2Q8TDQ7 276 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 PIK3R3Q92569 461 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 TRIM2Q9C040 744 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 PPIEQ9UNP9 301 aaKnown RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 SNNO75324 88 aaPredicted RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 PPM1BO75688 479 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ABLIM3O94929 683 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 CYB5AP00167 134 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 FOSL2P15408 326 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 CD9P21926 228 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 GKP32189 559 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 VIPR2P41587 438 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 GDF5P43026 501 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 TRA2BP62995 288 aaKnown RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 KIR2DS3Q14952 304 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 USP43Q70EL4 1123 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 PDZD3Q86UT5 571 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 GTPBP2Q9BX10 602 aaKnown RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 SP140LQ9H930 580 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 COMMD9Q9P000 198 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 PRKD3O94806 890 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ITIH1P19827 911 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ECHS1P30084 290 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 ZC3H14Q6PJT7 736 aaKnown RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 ACVR1CQ8NER5 493 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 SHKBP1Q8TBC3 707 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 SLC45A3Q96JT2 553 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 HSH2DQ96JZ2 352 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 COPS4Q9BT78 406 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 TREX1Q9NSU2 369 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 MYH4Q9Y623 1939 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 DNAJB5O75953 348 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 AHSA1O95433 338 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 OXSR1O95747 527 aaPredicted RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 FBLP22087 321 aaKnown RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 RYKP34925 604 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 PITPNAQ00169 270 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 EML3Q32P44 896 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 LIN52Q52LA3 116 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 NAPRTQ6XQN6 538 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 LRRC25Q8N386 305 aaPredicted RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 NFKBIDQ8NI38 313 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 GTPBP3Q969Y2 492 aaKnown RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
COL4A5-201ENST00000328300 SEC14L4Q9UDX3 406 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 HCN4Q9Y3Q4 1203 aa11□□□□□ -0.65
COL4A5-201ENST00000328300 E7ENX8 843 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 KHDRBS3O75525 346 aaKnown RBP10.99□□□□□ -0.65
COL4A5-201ENST00000328300 C6orf47O95873 294 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 PDYNP01213 254 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL4A5-201ENST00000328300 OSTF1Q92882 214 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 PAK6Q9NQU5 681 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-201ENST00000328300 PCTPQ9UKL6 214 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 WDR45Q9Y484 360 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 FAM149AA5PLN7 773 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 VSTM5A8MXK1 200 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 TMEM233B4DJY2 109 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 NUAK1O60285 661 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 MSX2P35548 267 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-201ENST00000328300 ZNF41P51814 821 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-201ENST00000328300 CDKN2DP55273 166 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 PON2Q15165 354 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 AHSA2Q719I0 299 aa10.99□□□□□ -0.65
COL4A5-201ENST00000328300 SLCO6A1Q86UG4 719 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms