RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 RAB7BQ96AH8 199 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 ABHD8Q96I13 439 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 FCRL1Q96LA6 429 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 MUS81Q96NY9 551 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 ITM2CQ9NQX7 267 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 VNN3Q9NY84 501 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 ABCG2Q9UNQ0 655 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 KLHL20Q9Y2M5 609 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 CCDC88CQ9P219 2028 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 MYO1GB0I1T2 1018 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 ZNF701M0R085 212 aaPredicted RBP11.9□□□□□ -0.5
RNF4-201ENST00000314289 ADAM23O75077 832 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 SCELO95171 688 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 FKBP9O95302 570 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 EGFP01133 1207 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 OPN1SWP03999 348 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 CD72P21854 359 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 MATN1P21941 496 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 ELK4P28324 431 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 HBA1P69905 142 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 ABHD18Q0P651 414 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 COX20Q5RI15 118 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 METRNLQ641Q3 311 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 FKBP9P1Q75LS8 142 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 PTOV1Q86YD1 416 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 NAGSQ8N159 534 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 OR8J2Q8NGG1 315 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 REXO5Q96IC2 774 aaKnown RBP11.9□□□□□ -0.5
RNF4-201ENST00000314289 HHIPQ96QV1 700 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 INSM2Q96T92 566 aaPredicted RBP11.9□□□□□ -0.5
RNF4-201ENST00000314289 EFCAB11Q9BUY7 163 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 TRIM64CA6NLI5 447 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 PDZK1P1A8MUH7 402 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 KLHL18O94889 574 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
RNF4-201ENST00000314289 ZNF12P17014 697 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 TNFRSF1BP20333 461 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 CDH3P22223 829 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 CRATP43155 626 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 ALDH9A1P49189 494 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 PPP2CBP62714 309 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 PPP2CAP67775 309 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 NFATC3Q12968 1075 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 CYP2A13Q16696 494 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 SPIN4Q56A73 249 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 PAGE2BQ5JRK9 111 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 GALNT5Q7Z7M9 940 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 DCUN1D3Q8IWE4 304 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 PACRGLQ8N7B6 248 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 ANKRD53Q8N9V6 530 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 LINC01555Q8NAE3 123 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 FANCEQ9HB96 536 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 PNMA8BQ9ULN7 279 aaPredicted RBP11.9□□□□□ -0.5
RNF4-201ENST00000314289 TICRRQ7Z2Z1 1910 aa11.9□□□□□ -0.5
RNF4-201ENST00000314289 WASHC1A8K0Z3 465 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 PI15O43692 258 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 ALBP02768 609 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 IL3P08700 152 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 CCNA2P20248 432 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 C5AR1P21730 350 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 KELP23276 732 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 PTGER1P34995 402 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 CAPGP40121 348 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 ZNF763Q0D2J5 394 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 MLF2Q15773 248 aaPredicted RBP11.9□□□□□ -0.51
RNF4-201ENST00000314289 MPEG1Q2M385 716 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 WASH2PQ6VEQ5 465 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 ZZZ3Q8IYH5 903 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 OR5K2Q8NHB8 316 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 ZNF420Q8TAQ5 688 aaPredicted RBP11.9□□□□□ -0.51
RNF4-201ENST00000314289 UCN3Q969E3 161 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 ELSPBP1Q96BH3 223 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 MAGEB10Q96LZ2 347 aaPredicted RBP11.9□□□□□ -0.51
RNF4-201ENST00000314289 PRDM8Q9NQV8 689 aa11.9□□□□□ -0.51
RNF4-201ENST00000314289 IFT80Q9P2H3 777 aaPredicted RBP11.9□□□□□ -0.51
RNF4-201ENST00000314289 POM121BA6NF01 834 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 NPIPB8E9PQR5 432 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 HS6ST1O60243 411 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 KLF8O95600 359 aaPredicted RBP11.89□□□□□ -0.51
RNF4-201ENST00000314289 TBX6O95947 436 aaPredicted RBP11.89□□□□□ -0.51
RNF4-201ENST00000314289 BCL10O95999 233 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 ALPLP05186 524 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 ETFAP13804 333 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 HPCAL1P37235 193 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 PIGAP37287 484 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 CLCA4Q14CN2 919 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 VMACQ2NL98 169 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 C17orf64Q86WR6 236 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 ZDHHC21Q8IVQ6 265 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 FBXO15Q8NCQ5 510 aaPredicted RBP11.89□□□□□ -0.51
RNF4-201ENST00000314289 ADAMTS16Q8TE57 1224 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 C16orf78Q8WTQ4 265 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 PYURFQ96I23 114 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 FAM120CQ9NX05 1096 aaKnown RBP11.89□□□□□ -0.51
RNF4-201ENST00000314289 MAP4K5Q9Y4K4 846 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 CKAP5Q14008 2032 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 SERTM1A2A2V5 107 aa11.89□□□□□ -0.51
RNF4-201ENST00000314289 MITFO75030 526 aaPredicted RBP11.89□□□□□ -0.51
RNF4-201ENST00000314289 HOXB2P14652 356 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms