RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ZNF888P0CJ79 500 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 SMIM10L1P0DMW3 83 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 ITGAXP20702 1163 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 RAP1GDS1P52306 607 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 ABCE1P61221 599 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 MC1RQ01726 317 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 OCA2Q04671 838 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 STX3Q13277 289 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 CLN3Q13286 438 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 NCF4Q15080 339 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 C1orf189Q5VU69 101 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 BROXQ5VW32 411 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 PAGE2Q7Z2X7 111 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 CLYBLQ8N0X4 340 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 ZCCHC10Q8TBK6 192 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 MGARPQ8TDB4 240 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 COL26A1Q96A83 441 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 MOCOSQ96EN8 888 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 SMIM10Q96HG1 83 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 METTL2AQ96IZ6 378 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 QRFPRQ96P65 431 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 ILKAPQ9H0C8 392 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 CHST8Q9H2A9 424 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 GPN2Q9H9Y4 310 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 ZNF282Q9UDV7 671 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 A0A0A6YYC8 382 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 MAGEB17A8MXT2 336 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 I3L1I5 382 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 UBFD1O14562 309 aaKnown RBP16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 PCDH17O14917 1159 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 FOXS1O43638 330 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 TLX3O43711 291 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 B3GALT2O43825 422 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 KLHL18O94889 574 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 TCN2P20062 427 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 HNRNPH1P31943 449 aaKnown RBP16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 MTTPP55157 894 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 RPS13P62277 151 aaKnown RBP16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 AP5B1Q2VPB7 878 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 DEFB134Q4QY38 66 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 ABHD17CQ6PCB6 329 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 FAM198BQ6UWH4 519 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 ZCCHC23Q6ZST2 131 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 OVCH1Q7RTY7 1134 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 C7orf57Q8NEG2 295 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 DYDC1Q8WWB3 177 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 NACC2Q96BF6 587 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 OR1F2PQ96R84 312 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 SERINC2Q96SA4 455 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 MACROD1Q9BQ69 325 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 TGIF2Q9GZN2 237 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 INTS9Q9NV88 658 aaKnown RBP16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 THAP1Q9NVV9 213 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 ADAM29Q9UKF5 820 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 CROTQ9UKG9 612 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 NAALAD2Q9Y3Q0 740 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 SPACA6W5XKT8 324 aa16.98■□□□□ 0.31
SSSCA1-201ENST00000309328 IGLV3-12A0A075B6K2 115 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 A0A087WV48 116 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 A0A1B0GTL3 188 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 SYNDIG1LA6NDD5 238 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 KLK10O43240 276 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 SCELO95171 688 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 TGFB1P01137 390 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 IL1RNP18510 177 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 BGNP21810 368 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 DLSTP36957 453 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 SLC1A6P48664 564 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 DNASE1L3Q13609 305 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 CRTC2Q53ET0 693 aaPredicted RBP16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 KANK2Q63ZY3 851 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 MRPL14Q6P1L8 145 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 TRIM46Q7Z4K8 759 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 ZSCAN1Q8NBB4 408 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 OR9A4Q8NGU2 314 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 CT55Q8WUE5 264 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 CCNL2Q96S94 520 aaPredicted RBP16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 MANSC1Q9H8J5 431 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 MLXIPLQ9NP71 852 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 ACSS2Q9NR19 701 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 VPS29Q9UBQ0 182 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 HAO1Q9UJM8 370 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 RAP2CQ9Y3L5 183 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 TRAF6Q9Y4K3 522 aa16.97■□□□□ 0.31
SSSCA1-201ENST00000309328 TEX51A0A1B0GUA7 166 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 BLACEA4D250 179 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 TERTO14746 1132 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 TBX6O95947 436 aaPredicted RBP16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 PDYNP01213 254 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 STATHP02808 62 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 CHN1P15882 459 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 PTPN4P29074 926 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 SSR2P43308 183 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 OR1D4P47884 311 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 NEK2P51955 445 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 HK2P52789 917 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 PLA2G16P53816 162 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 RAB8AP61006 207 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 SPIN4Q56A73 249 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms