RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 TEX47Q8TBZ9 253 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 RIT1Q92963 219 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 CCDC86Q9H6F5 360 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 NUFIP1Q9UHK0 495 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 ZNF490Q9ULM2 529 aaPredicted RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 UGT2A1Q9Y4X1 527 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 PAPPA2Q9BXP8 1791 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 TRAV6A0A075B6T7 132 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 C2orf78A6NCI8 922 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ATP6V1G2-DDX39BF2Z307 99 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 SLC28A1O00337 649 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 STK16O75716 305 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 NT5EP21589 574 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 RPL10P27635 214 aaKnown RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 HERVK_113P63132 956 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ALG11Q2TAA5 492 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 TPGS2Q68CL5 300 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ZNF767PQ75MW2 155 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 FAM129CQ86XR2 697 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.98□□□□□ -0.97
XCR1-201ENST00000309285 ERVK-6Q9BXR3 956 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 PCDHB16Q9NRJ7 776 aa8.98□□□□□ -0.97
XCR1-201ENST00000309285 ATG13O75143 517 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 GJB3O75712 270 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 TPPPO94811 219 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CD72P21854 359 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 RPIAP49247 311 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 HLCSP50747 726 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 TSPAN5P62079 268 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 RFTN1Q14699 578 aaPredicted RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 CPTPQ5TA50 214 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 PXDC1Q5TGL8 231 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 GALNT13Q8IUC8 556 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 PIAS4Q8N2W9 510 aaPredicted RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 ZFP90Q8TF47 636 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 SLC39A13Q96H72 371 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 FBRSL1Q9HCM7 1045 aaKnown RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 FANCFQ9NPI8 374 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CD93Q9NPY3 652 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.97□□□□□ -0.97
XCR1-201ENST00000309285 A0A1W2PRU2 124 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CDC7O00311 574 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 STC2O76061 302 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 IFNA6P05013 189 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 FABP3P05413 133 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 PRSS56P0CW18 603 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 FSHRP23945 695 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 GRK5P34947 590 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CDKN2DP55273 166 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CAV3P56539 151 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 BTN1A1Q13410 526 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 MBTPS1Q14703 1052 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 TSTQ16762 297 aaKnown RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 TECRLQ5HYJ1 363 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 GRHL2Q6ISB3 625 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 VITQ6UXI7 678 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 TMEM173Q86WV6 379 aaPredicted RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 PSD4Q8NDX1 1056 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 OR4A15Q8NGL6 344 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 OR5K1Q8NHB7 308 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 SLC38A2Q96QD8 506 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 GAL3ST4Q96RP7 486 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 ZNF350Q9GZX5 532 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 EIF2B4Q9UI10 523 aaKnown RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 TTC34A8MYJ7 566 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 C2orf74A8MZ97 194 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 TNFRSF11BO00300 401 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 SOCS2O14508 198 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 SLC22A2O15244 555 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 HCN1O60741 890 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CSN2P05814 226 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 ITGA2P17301 1181 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 UGT2B15P54855 530 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 ERVK-8P63133 956 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 MVKQ03426 396 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 VMACQ2NL98 169 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CDKL4Q5MAI5 379 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 LYPLAL1Q5VWZ2 237 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.97□□□□□ -0.97
XCR1-201ENST00000309285 SSX6Q7RTT6 188 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 LYSMD3Q7Z3D4 306 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CLDN19Q8N6F1 224 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 GTPBP3Q969Y2 492 aaKnown RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 SH3YL1Q96HL8 342 aaPredicted RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 LHPPQ9H008 270 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 C3orf14Q9HBI5 128 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 MARK1Q9P0L2 795 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 GIMAP2Q9UG22 337 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 A0A0G2JN53 185 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 TMEM221A6NGB7 291 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 DISC1C4P0D8 188 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 M0R036 132 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 KDELR3O43731 214 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 SPARCP09486 303 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 SAGP10523 405 aaPredicted RBP8.97□□□□□ -0.97
XCR1-201ENST00000309285 C2orf80Q0P641 193 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 AMZ1Q400G9 498 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 CCDC58Q4VC31 144 aa8.97□□□□□ -0.97
XCR1-201ENST00000309285 IDNKQ5T6J7 187 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms