RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 HMGCLP35914 325 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 OC90Q02509 493 aaPredicted RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 NANOGNBQ7Z5D8 188 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 KBTBD6Q86V97 674 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 UBE2J2Q8N2K1 259 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 OR5P2Q8WZ92 322 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 ADAD1Q96M93 576 aaKnown RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 MS4A12Q9NXJ0 267 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 A8MU76 341 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 PSMD9O00233 223 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 WRBO00258 174 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 TYRP1P17643 537 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 EDNRAP25101 427 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 CDH11P55287 796 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 WDR45BQ5MNZ6 344 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 PM20D1Q6GTS8 502 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 SLC39A5Q6ZMH5 540 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 NRROSQ86YC3 692 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 GPALPP1Q8IXQ4 340 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 ENDOVQ8N8Q3 282 aaKnown RBP15.38■□□□□ 0.05
USP42-201ENST00000306177 OR4K14Q8NGD5 310 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 OR5T3Q8NGG3 340 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 MAPK15Q8TD08 544 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 RDH12Q96NR8 316 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 TSSK6Q9BXA6 273 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 MYH8P13535 1937 aa15.38■□□□□ 0.05
USP42-201ENST00000306177 TIA1P31483 386 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP42-201ENST00000306177 ARSFP54793 590 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 PON3Q15166 354 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 SGCBQ16585 318 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 SWI5Q1ZZU3 235 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 C12orf40Q86WS4 652 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 TAMM41Q96BW9 452 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 FBXL20Q96IG2 436 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 TAS2R9Q9NYW1 312 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 NLGN3Q9NZ94 848 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 SERTAD3Q9UJW9 196 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 C2orf74A8MZ97 194 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 ITGB1P05556 798 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 TSTQ16762 297 aaKnown RBP15.37■□□□□ 0.05
USP42-201ENST00000306177 ZNF648Q5T619 568 aaPredicted RBP15.37■□□□□ 0.05
USP42-201ENST00000306177 ARL9Q6T311 187 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 LRRTM3Q86VH5 581 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 TP53INP2Q8IXH6 220 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 BBS10Q8TAM1 723 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 HERPUD2Q9BSE4 406 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 AIG1Q9NVV5 245 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 HRASLS2Q9NWW9 162 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 KLRF1Q9NZS2 232 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 GMEB2Q9UKD1 530 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 GLOD5A6NK44 160 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 CH25HO95992 272 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 JUPP14923 745 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 IVDP26440 423 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 CDKN1CP49918 316 aaPredicted RBP15.37■□□□□ 0.05
USP42-201ENST00000306177 TRAM2Q15035 370 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 MEP1AQ16819 746 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 COLEC12Q5KU26 742 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 HSDL2Q6YN16 418 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 ARMCX6Q7L4S7 300 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 MINDY2Q8NBR6 621 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 PHOSPHO1Q8TCT1 267 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 GAL3ST1Q99999 423 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 TMEM5Q9Y2B1 443 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 A0A1W2PP55 124 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 HTRA2O43464 458 aaPredicted RBP15.37■□□□□ 0.05
USP42-201ENST00000306177 INMTO95050 263 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 KLK3P07288 261 aaPredicted RBP15.37■□□□□ 0.05
USP42-201ENST00000306177 ARF5P84085 180 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 MLIPQ5VWP3 458 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 C12orf76Q8N812 135 aaPredicted RBP15.37■□□□□ 0.05
USP42-201ENST00000306177 RAB8BQ92930 207 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 MS4A4AQ96JQ5 239 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 CST11Q9H112 138 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 XKR8Q9H6D3 395 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 CHD4Q14839 1912 aa15.37■□□□□ 0.05
USP42-201ENST00000306177 TTC34A8MYJ7 566 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ENTPD6O75354 484 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 SOX14O95416 240 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 HLA-DPB1P04440 258 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 RAB15P59190 212 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 TUBA1BP68363 451 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 CBLBQ13191 982 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ATP6AP1Q15904 470 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 TUBA1AQ71U36 451 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 TMEM203Q969S6 136 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 WDR92Q96MX6 357 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 CENPMQ9NSP4 180 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 GIN1Q9NXP7 522 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ZNF670-ZNF695F2Z2N8 137 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 H3BSA7 217 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 BCKDHAP12694 445 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 NR2C1P13056 603 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 ARSDP51689 593 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 CLLU1OSQ5K130 101 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 SLITRK4Q8IW52 837 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 KRTCAP2Q8N6L1 136 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 SMARCD2Q92925 531 aa15.36■□□□□ 0.05
USP42-201ENST00000306177 RC3H2Q9HBD1 1191 aaKnown RBP15.36■□□□□ 0.05
USP42-201ENST00000306177 FAM53CQ9NYF3 392 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms