RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 EMCNQ9ULC0 261 aa17.21■□□□□ 0.34
SPSB3-201ENST00000301717 RNF11Q9Y3C5 154 aa17.21■□□□□ 0.34
SPSB3-201ENST00000301717 COL6A6A6NMZ7 2263 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 CCDC189A1A4V9 331 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 FAM227AF5H4B4 570 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 SAP18O00422 153 aaKnown RBP17.2■□□□□ 0.34
SPSB3-201ENST00000301717 KRT15P19012 456 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 CASP2P42575 452 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 CDH13P55290 713 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 Q0VFX4 171 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 E2F2Q14209 437 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 PAGE2BQ5JRK9 111 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 GRHL2Q6ISB3 625 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 MED27Q6P2C8 311 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 SH2D5Q6ZV89 423 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 PARP9Q8IXQ6 854 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 OR7G3Q8NG95 312 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 ZNF473Q8WTR7 871 aaKnown RBP17.2■□□□□ 0.34
SPSB3-201ENST00000301717 SLC25A23Q9BV35 468 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 ZNF160Q9HCG1 818 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 TUBD1Q9UJT1 453 aa17.2■□□□□ 0.34
SPSB3-201ENST00000301717 RTCAO00442 366 aaKnown RBP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 B4GALT2O60909 372 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 CLEC3AO75596 197 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 TGFB1P01137 390 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 CELA2AP08217 269 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 COX6A1P12074 109 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 ACPPP15309 386 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 ARL1P40616 181 aaPredicted RBP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 RRADP55042 308 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 RUNX2Q13950 521 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 CPSF6Q16630 551 aaKnown RBP eCLIP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 HIST2H2ACQ16777 129 aaPredicted RBP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 TUBB8Q3ZCM7 444 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 LACTB2Q53H82 288 aaPredicted RBP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 HIST2H2AA3Q6FI13 130 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 UBE3DQ7Z6J8 389 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 TDRPQ86YL5 185 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 C4orf33Q8N1A6 199 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 CLEC1AQ8NC01 280 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 TTLQ8NG68 377 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 TSLPQ969D9 159 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 GAL3ST3Q96A11 431 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 FER1L6-AS2Q96M78 137 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 IP6K3Q96PC2 410 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 SORBS1Q9BX66 1292 aaKnown RBP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 REXO4Q9GZR2 422 aaKnown RBP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 SEMA4BQ9NPR2 832 aaPredicted RBP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 LANCL2Q9NS86 450 aa17.19■□□□□ 0.34
SPSB3-201ENST00000301717 TNPO3Q9Y5L0 923 aaKnown RBP17.19■□□□□ 0.34
SPSB3-201ENST00000301717 TNRC6AQ8NDV7 1962 aaKnown RBP17.18■□□□□ 0.34
SPSB3-201ENST00000301717 STX16-NPEPL1H3BU86 382 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 PYCARD-AS1I3L0S3 204 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 STX16O14662 325 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 DLX3O60479 287 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 CEACAM4O75871 244 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 RPS17P08708 135 aaKnown RBP17.18■□□□□ 0.34
SPSB3-201ENST00000301717 CERS1P27544 350 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 NEK2P51955 445 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 STXBP1P61764 594 aaKnown RBP17.18■□□□□ 0.34
SPSB3-201ENST00000301717 PCDH1Q08174 1060 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 LAPTM5Q13571 262 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 ADPRMQ3LIE5 342 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 EMBQ6PCB8 327 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 ASB18Q6ZVZ8 466 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 LAS2Q8IYD9 372 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 CA13Q8N1Q1 262 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 GALNT16Q8N428 558 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 HUS1BQ8NHY5 278 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 ACMSDQ8TDX5 336 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 CAVIN3Q969G5 261 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 TMEM237Q96Q45 408 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 MTERF1Q99551 399 aaKnown RBP17.18■□□□□ 0.34
SPSB3-201ENST00000301717 MS4A8Q9BY19 250 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 PITHD1Q9GZP4 211 aaPredicted RBP17.18■□□□□ 0.34
SPSB3-201ENST00000301717 OR51B5Q9H339 312 aa17.18■□□□□ 0.34
SPSB3-201ENST00000301717 FASNP49327 2511 aaKnown RBP17.17■□□□□ 0.34
SPSB3-201ENST00000301717 URADA6NGE7 173 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 IGHEP01854 428 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 FHP07954 510 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 NUDT17P0C025 328 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 C8orf89P0DMQ9 161 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 SFTPCP11686 197 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 ITGA3P26006 1051 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 BTG2P78543 158 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 RHAGQ02094 409 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 TRAF3Q13114 568 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 ZRSR2Q15696 482 aaKnown RBP17.17■□□□□ 0.34
SPSB3-201ENST00000301717 TCTN3Q6NUS6 607 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 ABHD17CQ6PCB6 329 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 ZNF793Q6ZN11 406 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 OR2L5Q8NG80 312 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 ATP6V1E2Q96A05 226 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 TBC1D20Q96BZ9 403 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 MTFMTQ96DP5 389 aaKnown RBP17.17■□□□□ 0.34
SPSB3-201ENST00000301717 QRFPRQ96P65 431 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 ZBTB20Q9HC78 741 aaPredicted RBP17.17■□□□□ 0.34
SPSB3-201ENST00000301717 MLXIPLQ9NP71 852 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 ATP13A2Q9NQ11 1180 aa17.17■□□□□ 0.34
SPSB3-201ENST00000301717 GPR83Q9NYM4 423 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms