RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CLCA3PQ9Y6N3 262 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 HYKKA2RU49 373 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 ANKRD66B4E2M5 251 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 POMCP01189 267 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 IGHA2P01877 340 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 MSL3P1P0C860 447 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 ACADMP11310 421 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 ITGB7P26010 798 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 GAB1Q13480 694 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 ARHGEF7Q14155 803 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 ZXDCQ2QGD7 858 aaPredicted RBP10.46□□□□□ -0.74
ZNF558-201ENST00000301475 PYDC2Q56P42 97 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 PAQR6Q6TCH4 344 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 PLET1Q6UQ28 207 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 MSANTD1Q6ZTZ1 278 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 MON1AQ86VX9 555 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 LAS2Q8IYD9 372 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 GDPD1Q8N9F7 314 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 ATP6V1C2Q8NEY4 427 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 SLC25A46Q96AG3 418 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 MSLNLQ96KJ4 702 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 GTPBP2Q9BX10 602 aaKnown RBP10.46□□□□□ -0.74
ZNF558-201ENST00000301475 B3GNT4Q9C0J1 378 aa10.46□□□□□ -0.74
ZNF558-201ENST00000301475 ABI2Q9NYB9 513 aaPredicted RBP10.46□□□□□ -0.74
ZNF558-201ENST00000301475 H7C0S8 307 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 PCDH17O14917 1159 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 PCDH7O60245 1069 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 TPST2O60704 377 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 STK16O75716 305 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 C1SP09871 688 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 TSPAN19P0C672 248 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 CTPS1P17812 591 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 PSMA1P25786 263 aaKnown RBP10.45□□□□□ -0.74
ZNF558-201ENST00000301475 EVI2BP34910 448 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 CNR2P34972 360 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 MAP2K3P46734 347 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 CASP9P55211 416 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 CDC42P60953 191 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 RHAGQ02094 409 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.45□□□□□ -0.74
ZNF558-201ENST00000301475 CST9Q5W186 159 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 NOXRED1Q6NXP6 359 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 WDR53Q7Z5U6 358 aaPredicted RBP10.45□□□□□ -0.74
ZNF558-201ENST00000301475 CDC26Q8NHZ8 85 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 SH3KBP1Q96B97 665 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 IL4I1Q96RQ9 567 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 FAM129BQ96TA1 746 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 TMEM245Q9H330 911 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 ELOVL6Q9H5J4 265 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 DIABLOQ9NR28 239 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 EIF3KQ9UBQ5 218 aaKnown RBP10.45□□□□□ -0.74
ZNF558-201ENST00000301475 SEC14L4Q9UDX3 406 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 FTSJ1Q9UET6 329 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 STUB1Q9UNE7 303 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 KCNE1BA0A087WTH5 132 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 FAM227AF5H4B4 570 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 ENTPD6O75354 484 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 SLC25A14O95258 325 aaPredicted RBP10.45□□□□□ -0.74
ZNF558-201ENST00000301475 FAM157BP0CG42 384 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 LAMP1P11279 417 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 AMD1P17707 334 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 WEE1P30291 646 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 MAPKAPK2P49137 400 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 MAN2A2P49641 1150 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 SPHARQ15513 63 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 DGKKQ5KSL6 1271 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 LIPKQ5VXJ0 399 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 PTCHD4Q6ZW05 846 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 STK40Q8N2I9 435 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 ZBED6CLQ96FA7 236 aaPredicted RBP10.45□□□□□ -0.74
ZNF558-201ENST00000301475 SPON2Q9BUD6 331 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 NDUFB11Q9NX14 153 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 GLTPQ9NZD2 209 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 SCML2Q9UQR0 700 aa10.45□□□□□ -0.74
ZNF558-201ENST00000301475 SH3D21A4FU49 640 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PRAMEF4O60810 478 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 CHRM5P08912 532 aaPredicted RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 COX7A2P14406 83 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 APEX1P27695 318 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 RPL9P32969 192 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 RGS4P49798 205 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF157P51786 506 aaPredicted RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 ABRQ12979 859 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SF1Q15637 639 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 HKDC1Q2TB90 917 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PRAMEF19Q5SWL8 479 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PRAMEF9Q5VWM5 478 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SERPINA9Q86WD7 417 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SLC34A3Q8N130 599 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 C9orf62Q8N4C0 152 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 ESX1Q8N693 406 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 CMTM7Q96FZ5 175 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SLC6A18Q96N87 628 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 COPS8Q99627 209 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 RERGLQ9H628 205 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 C11orf16Q9NQ32 467 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 B3GNT2Q9NY97 397 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 DNAJC27Q9NZQ0 273 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 NLKQ9UBE8 527 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 HCN4Q9Y3Q4 1203 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms