RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 BMP4P12644 408 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 NTHL1P78549 312 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 SCN1BQ07699 218 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 TMEM115Q12893 351 aaPredicted RBP12.81□□□□□ -0.36
CASC4-201ENST00000299957 HNRNPA0Q13151 305 aaKnown RBP12.81□□□□□ -0.36
CASC4-201ENST00000299957 TEAD4Q15561 434 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 DESI1Q6ICB0 168 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 SBSNQ6UWP8 590 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 MACC1Q6ZN28 852 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 ADAP2Q9NPF8 381 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 SLC6A13Q9NSD5 602 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 IL37Q9NZH6 218 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 ENOPH1Q9UHY7 261 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 WWP2O00308 870 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 STK25O00506 426 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 SPTBP11277 2137 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 PDHA2P29803 388 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 FBXW4P57775 412 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 ADPRMQ3LIE5 342 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 IDNKQ5T6J7 187 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 OR13F1Q8NGS4 319 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 NECTIN4Q96NY8 510 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 SLC38A2Q96QD8 506 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 C17orf62Q9BQA9 187 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 ZNF282Q9UDV7 671 aaPredicted RBP12.81□□□□□ -0.36
CASC4-201ENST00000299957 TTC34A8MYJ7 566 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CELP19835 753 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 MAGEA11P43364 429 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CLCNKAP51800 687 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 HOXC5Q00444 222 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.8□□□□□ -0.36
CASC4-201ENST00000299957 IHHQ14623 411 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 NKG7Q16617 165 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CCSMST1Q4G0I0 132 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 DLEU7Q6UYE1 221 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CCDC80Q76M96 950 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 SPRED1Q7Z699 444 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 RTN4RL1Q86UN2 441 aaPredicted RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 FAM83FQ8NEG4 500 aaPredicted RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 OR10H4Q8NGA5 316 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 OR8H1Q8NGG4 311 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 NCSTNQ92542 709 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 MRPL39Q9NYK5 338 aaKnown RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 FNIP2Q9P278 1114 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 KCNK6Q9Y257 313 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 H0YC42 278 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 SSNA1O43805 119 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 ADH1AP07327 375 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CPN2P22792 545 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CSTF1Q05048 431 aaKnown RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 C11orf88Q6PI97 169 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 PLEKHG7Q6ZR37 379 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 WDR53Q7Z5U6 358 aaPredicted RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 CDH24Q86UP0 819 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 ZNF740Q8NDX6 193 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 KATNBL1Q9H079 304 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 MMP28Q9H239 520 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 COQ3Q9NZJ6 369 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 ENPP5Q9UJA9 477 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CLEC4EQ9ULY5 219 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 INSL5Q9Y5Q6 135 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 A0A1W2PQ45 241 aaPredicted RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 A0A1W2PQY0 241 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 SAGE2PA6NJ88 616 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CA12O43570 354 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 PRLP01236 227 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 BMP1P13497 986 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 ZNF8P17098 575 aaPredicted RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 BMP7P18075 431 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 DAPP51397 102 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 CAV3P56539 151 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 PIN1Q13526 163 aaPredicted RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 TBRG1Q3YBR2 411 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 TMIGD1Q6UXZ0 262 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 B3GLCTQ6Y288 498 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 ZNF517Q6ZMY9 492 aaPredicted RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 ADAMTS15Q8TE58 950 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 SLC30A2Q9BRI3 323 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 BRINP2Q9C0B6 783 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 NEK6Q9HC98 313 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 HCFC1R1Q9NWW0 138 aa12.8□□□□□ -0.36
CASC4-201ENST00000299957 PAQR5Q9NXK6 330 aaPredicted RBP12.8□□□□□ -0.36
CASC4-201ENST00000299957 WNT9AO14904 365 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 TPD52L2O43399 206 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 NPPAP01160 153 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 DCKP27707 260 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 RPL4P36578 427 aaKnown RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 NCBP2P52298 156 aaKnown RBP eCLIP12.79□□□□□ -0.36
CASC4-201ENST00000299957 CTSCP53634 463 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 PSRC1Q6PGN9 363 aaPredicted RBP12.79□□□□□ -0.36
CASC4-201ENST00000299957 HSDL2Q6YN16 418 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 LRRC70Q7Z2Q7 622 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 TMEM145Q8NBT3 493 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 AIF1LQ9BQI0 150 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 CCDC3Q9BQI4 270 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 HDHD5Q9BXW7 423 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 SYNDIG1Q9H7V2 258 aa12.79□□□□□ -0.36
CASC4-201ENST00000299957 SLC25A37Q9NYZ2 338 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms