RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 MYBPHLA2RUH7 354 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 YJEFN3A6XGL0 299 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 H7C417 338 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 EIF3FO00303 357 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 TGFB1I1O43294 461 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 PCDHGA12O60330 932 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 POP7O75817 140 aaKnown RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 KCNE1P15382 129 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 FMO3P31513 532 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 GPR143P51810 404 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 CASP7P55210 303 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 PMS2P3Q13401 168 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 LASP1Q14847 261 aaKnown RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 PLEKHS1Q5SXH7 462 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ARSKQ6UWY0 536 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 OR51D1Q8NGF3 324 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 NAT14Q8WUY8 206 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 CIB1Q99828 191 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 CENPOQ9BU64 300 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 POLDIP3Q9BY77 421 aaKnown RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 B3GNT5Q9BYG0 378 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 DERL2Q9GZP9 239 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 BRF2Q9HAW0 419 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 SCML2Q9UQR0 700 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 NOP16Q9Y3C1 178 aaKnown RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 LCHNA4D1U4 455 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 C2orf72A6NCS6 295 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 A6NLC8 198 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 POLR1CO15160 346 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ASGR2P07307 311 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 MMP2P08253 660 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 HK1P19367 917 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 RPS15AP62244 130 aaKnown RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 PSPHP78330 225 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 CDK6Q00534 326 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 VWA5B1Q5TIE3 1220 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 GDF6Q6KF10 455 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 RTL10Q7L3V2 364 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 SMG8Q8ND04 991 aaKnown RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 OR4K14Q8NGD5 310 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 FANK1Q8TC84 345 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 NXNL1Q96CM4 212 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 GIMAP5Q96F15 307 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 IGSF21Q96ID5 467 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 TMEM209Q96SK2 561 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 TMEM168Q9H0V1 697 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 HRASLS2Q9NWW9 162 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 MALT1Q9UDY8 824 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 MLXQ9UH92 298 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF541Q9H0D2 1346 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ABCA4P78363 2273 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 KLRG2A4D1S0 409 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 FABP12A6NFH5 140 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 LRRN3E7EW58 273 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 DNM1LO00429 736 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 MANBAO00462 879 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 GRID2O43424 1007 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 GLSO94925 669 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 IFNA10P01566 189 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ACTBP60709 375 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ACTG1P63261 375 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 CA9Q16790 459 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 SLC36A4Q6YBV0 504 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 Q6ZVU0 165 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ASPGQ86U10 573 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 TSPEARQ8WU66 669 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 PHF12Q96QT6 1004 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ACTRT3Q9BYD9 372 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 LRRN3Q9H3W5 708 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ABRACLQ9P1F3 81 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 COPZ2Q9P299 210 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 HCN2Q9UL51 889 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 WDR45Q9Y484 360 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 TELO2Q9Y4R8 837 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 CACNA1FO60840 1977 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 SLC18A1P54219 525 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 MLLT6P55198 1093 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 RPS24P62847 133 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 S100A12P80511 92 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 E2F1Q01094 437 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ACY1Q03154 408 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GK3PQ14409 553 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ARHGAP11AQ6P4F7 1023 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 RBM44Q6ZP01 1051 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 RALGPS2Q86X27 583 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF610Q8N9Z0 462 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 OR8S1Q8NH09 359 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PCDH19Q8TAB3 1148 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 JOSD2Q8TAC2 188 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 LMX1AQ8TE12 382 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 HSH2DQ96JZ2 352 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 TRIB3Q96RU7 358 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 STRA6Q9BX79 667 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 C12orf65Q9H3J6 166 aaKnown RBP3.93□□□□□ -1.78
SCN3A-201ENST00000283254 ACP6Q9NPH0 428 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 OXSMQ9NWU1 459 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 GRHL1Q9NZI5 618 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 COL20A1Q9P218 1284 aa3.93□□□□□ -1.78
SCN3A-201ENST00000283254 NOTCH2Q04721 2471 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms