RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CCNB2O95067 398 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 GASTP01350 101 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 CBLP22681 906 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 ACRV1P26436 265 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 GATMP50440 423 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 CSNK2BP67870 215 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 OLR1P78380 273 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 FBXO43Q4G163 708 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 PDZK1Q5T2W1 519 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 SERPINA13PQ6UXR4 307 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 TAGAPQ8N103 731 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 SYNPOQ8N3V7 929 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 DTX3Q8N9I9 347 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 C7orf57Q8NEG2 295 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 SLC7A6Q92536 515 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 OPALINQ96PE5 141 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 LINC00597Q9H2U6 94 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 HHATLQ9HCP6 504 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 CCDC88CQ9P219 2028 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 A0A0B4J293 547 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 A0A0G2JMP0 313 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 H3BN98 237 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 TPST2O60704 377 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 MYL9P24844 172 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 MAPK1P28482 360 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 DDOSTP39656 456 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 TUFMP49411 452 aaKnown RBP12.4□□□□□ -0.42
COL8A1-202ENST00000273342 CDC42P60953 191 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 MC1RQ01726 317 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 HNRNPA0Q13151 305 aaKnown RBP12.4□□□□□ -0.42
COL8A1-202ENST00000273342 FAM110CQ1W6H9 321 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 GPAT3Q53EU6 434 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 CPTPQ5TA50 214 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 ERICH5Q6P6B1 374 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 TTC23LQ6PF05 361 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-202ENST00000273342 CERS6Q6ZMG9 384 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 GPR26Q8NDV2 337 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 WFDC5Q8TCV5 224 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 PIH1D2Q8WWB5 315 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 RNF31Q96EP0 1072 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 SYT17Q9BSW7 474 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 POLR2J2Q9GZM3 115 aaKnown RBP12.4□□□□□ -0.42
COL8A1-202ENST00000273342 DKK3Q9UBP4 350 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 FABP12A6NFH5 140 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 C12orf71A8MTZ7 269 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 ADAMDEC1O15204 470 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 CLDN11O75508 207 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 ANXA4P09525 319 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-202ENST00000273342 TSPAN19P0C672 248 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 CD22P20273 847 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 CD72P21854 359 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 AOAHP28039 575 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 SELENOWP63302 87 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 MICAQ29983 383 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 C22orf42Q6IC83 251 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 USP50Q70EL3 339 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-202ENST00000273342 C11orf65Q8NCR3 313 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 ASIC4Q96FT7 647 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 CEP295NLQ96MC4 621 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 SLC29A3Q9BZD2 475 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 PLCXD1Q9NUJ7 323 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 TEKT2Q9UIF3 430 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 DNMT3LQ9UJW3 386 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 KLK4Q9Y5K2 254 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 A3GALT2U3KPV4 340 aa12.4□□□□□ -0.42
COL8A1-202ENST00000273342 PRAMEF33A0A0G2JMD5 474 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 A0A1W2PQL4 384 aaPredicted RBP12.4□□□□□ -0.43
COL8A1-202ENST00000273342 MTMR11A4FU01 709 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 H7C0S8 307 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 PLK4O00444 970 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 MRPS14O60783 128 aaKnown RBP12.4□□□□□ -0.43
COL8A1-202ENST00000273342 PRAMEF10O60809 474 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 TBL1XO60907 577 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 ZNF623O75123 536 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 OAZ2O95190 189 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 PSKH1P11801 424 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 GABRB1P18505 474 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 CD9P21926 228 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 CHMP24386 653 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 SOAT1P35610 550 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 ZNF157P51786 506 aaPredicted RBP12.4□□□□□ -0.43
COL8A1-202ENST00000273342 CLLU1OSQ5K130 101 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 HMGN2P46Q86SG4 172 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 MEX3DQ86XN8 651 aaKnown RBP12.4□□□□□ -0.43
COL8A1-202ENST00000273342 SLC38A6Q8IZM9 456 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 YIPF7Q8N8F6 280 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 ZNF557Q8N988 423 aaPredicted RBP12.4□□□□□ -0.43
COL8A1-202ENST00000273342 SYT14Q8NB59 555 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 OR5H6Q8NGV6 325 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 DNAJB8Q8NHS0 232 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 TBC1D20Q96BZ9 403 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 CCDC32Q9BV29 185 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 ASIC5Q9NY37 505 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 VPS29Q9UBQ0 182 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 LHX3Q9UBR4 397 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 POFUT2Q9Y2G5 429 aa12.4□□□□□ -0.43
COL8A1-202ENST00000273342 MGAT4DA6NG13 374 aa12.39□□□□□ -0.43
COL8A1-202ENST00000273342 HMX3A6NHT5 357 aa12.39□□□□□ -0.43
COL8A1-202ENST00000273342 COCHO43405 550 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms