RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 G6PC3Q9BUM1 346 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PBDC1Q9BVG4 233 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 SUV39H2Q9H5I1 410 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZFP57Q9NU63 452 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 GRHPRQ9UBQ7 328 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 KLHL21Q9UJP4 597 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ERI3O43414 337 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CHRM1P11229 460 aaPredicted RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 HSD3B1P14060 373 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 AFF1P51825 1210 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF763Q0D2J5 394 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 HNRNPA0Q13151 305 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 TRMT10BQ6PF06 316 aaKnown RBP7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZDHHC24Q6UX98 284 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 C3P1Q6ZMU1 363 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF550Q7Z398 422 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 CENPSQ8N2Z9 138 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 FAM86B1Q8N7N1 296 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 WACQ9BTA9 647 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 RGCCQ9H4X1 137 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 TMEM59LQ9UK28 342 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 PCDHB11Q9Y5F2 797 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 TEX264Q9Y6I9 313 aa7.73□□□□□ -1.17
LIMD1-201ENST00000273317 J3QLW9 94 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 AURKAO14965 403 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 DLX3O60479 287 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ADH1BP00325 375 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF19P17023 458 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 STC1P52823 247 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PSMA6P60900 246 aaKnown RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 RAB39AQ14964 217 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 TREML2Q5T2D2 321 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 HACD2Q6Y1H2 254 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 HSDL2Q6YN16 418 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 GOLGA7Q7Z5G4 137 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 SLAIN1Q8ND83 568 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 GATAD2BQ8WXI9 593 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PKP4Q99569 1192 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 DMAC2Q9NW81 257 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 COL20A1Q9P218 1284 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 RABL3Q5HYI8 236 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 COQ5Q5HYK3 327 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 DCUN1D3Q8IWE4 304 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 HS3ST5Q8IZT8 346 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ARL14Q8N4G2 192 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 SUN3Q8TAQ9 357 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 CD300LFQ8TDQ1 290 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 OR10A4Q9H209 315 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 COQ4Q9Y3A0 265 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 RGPD1P0DJD0 1748 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 UPK3BL1B0FP48 263 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 UPK3BL2E5RIL1 263 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 CCL22O00626 93 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ATG12O94817 140 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 COL28A1Q2UY09 1125 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF783Q6ZMS7 281 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF584Q8IVC4 421 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 C2orf73Q8N5S3 287 aaPredicted RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 NDRG1Q92597 394 aaKnown RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 MCCC2Q9HCC0 563 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 HAS3O00219 553 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ZBTB48P10074 688 aaPredicted RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ADH6P28332 368 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 SLC3A1Q07837 685 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PHC2Q8IXK0 858 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 OR5J2Q8NH18 312 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 KATNBL1Q9H079 304 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 CNOT11Q9UKZ1 510 aaKnown RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PADI3Q9ULW8 664 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 HSPB11Q9Y547 144 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 BCKDHAP12694 445 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 GNSP15586 552 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 HOXB9P17482 250 aaPredicted RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 S1PR1P21453 382 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 TCEAL1Q15170 157 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 NETO2Q8NC67 525 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 SLC25A36Q96CQ1 311 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 C16orf58Q96GQ5 468 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 CNN2Q99439 309 aaKnown RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 CMKLR1Q99788 373 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PKP2Q99959 881 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PCDHAC1Q9H158 963 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PHYHO14832 338 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 TMEM63AO94886 807 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 RPS3P23396 243 aaKnown RBP eCLIP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PAQR3Q6TCH7 311 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 MOB2Q70IA6 237 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 POTEKPQ9BYX7 375 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 C12orf65Q9H3J6 166 aaKnown RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ASB6Q9NWX5 421 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 SCN2AQ99250 2005 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 TLE2Q04725 743 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 SAMD12Q8N8I0 201 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 BORCS8Q96FH0 119 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PTPN18Q99952 460 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 GOLGA2P5Q9HBQ8 144 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PCDHGC4Q9Y5F7 938 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 TRIM64CA6NLI5 447 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PIGRP01833 764 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms