RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CHI3L1P36222 383 aaPredicted RBP16.13■□□□□ 0.17
SQLE-201ENST00000265896 RAB15P59190 212 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 ELP6Q0PNE2 266 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 DUSP7Q16829 419 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 SLC5A12Q1EHB4 618 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 WASH2PQ6VEQ5 465 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 USP45Q70EL2 814 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 GAREM2Q75VX8 874 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 IQCF1Q8N6M8 205 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 OR7G3Q8NG95 312 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 CSGALNACT1Q8TDX6 532 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 UBTD2Q8WUN7 234 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 RDH14Q9HBH5 336 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 TIGARQ9NQ88 270 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 IFT52Q9Y366 437 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 PCDHGB3Q9Y5G1 929 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 CFAP20Q9Y6A4 193 aaKnown RBP16.13■□□□□ 0.17
SQLE-201ENST00000265896 SCAMP2O15127 329 aaKnown RBP16.13■□□□□ 0.17
SQLE-201ENST00000265896 RGS6P49758 472 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 METAP1P53582 386 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 RACK1P63244 317 aaKnown RBP16.13■□□□□ 0.17
SQLE-201ENST00000265896 IRF5Q13568 498 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 IRF3Q14653 427 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 GPR33Q49SQ1 333 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 C1QTNF12Q5T7M4 302 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 VOPP1Q96AW1 172 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 CEP19Q96LK0 163 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 VPS35Q96QK1 796 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 SNTG1Q9NSN8 517 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 TMEM45AQ9NWC5 275 aa16.13■□□□□ 0.17
SQLE-201ENST00000265896 LOC110117498-PIK3R3F6TDL0 507 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 ASNA1O43681 348 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 GASTP01350 101 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 RPLP0P05388 317 aaKnown RBP16.12■□□□□ 0.17
SQLE-201ENST00000265896 CDK1P06493 297 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 KLK1P06870 262 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 PAX3P23760 479 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 CNR2P34972 360 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 ALDH9A1P49189 494 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 SPINT3P49223 89 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 SRSF11Q05519 484 aaKnown RBP16.12■□□□□ 0.17
SQLE-201ENST00000265896 PTGES3Q15185 160 aaKnown RBP16.12■□□□□ 0.17
SQLE-201ENST00000265896 BCL7AQ4VC05 210 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 C11orf65Q8NCR3 313 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 FADS2P1A8MWK0 482 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 CCNKO75909 580 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 SEMG1P04279 462 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 IDSP22304 550 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 GGT2P36268 569 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 SCARB2Q14108 478 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 C10orf62Q5T681 223 aaPredicted RBP16.12■□□□□ 0.17
SQLE-201ENST00000265896 L3MBTL4Q8NA19 623 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 C7orf57Q8NEG2 295 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 OR52E4Q8NGH9 312 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 NECTIN4Q96NY8 510 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 GABARAPL1Q9H0R8 117 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 NUMA1Q14980 2115 aa16.12■□□□□ 0.17
SQLE-201ENST00000265896 H3BN98 237 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 KMOO15229 486 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 ZW10O43264 779 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 ALOX5P09917 674 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 BMPR1AP36894 532 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 TAS2R50P59544 299 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 C2orf80Q0P641 193 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 MTAPQ13126 283 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 PTCHD4Q6ZW05 846 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 SLC46A3Q7Z3Q1 461 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 NRARPQ7Z6K4 114 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 GPR65Q8IYL9 337 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 TAGAPQ8N103 731 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 SLC34A3Q8N130 599 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 AMER2Q8N7J2 671 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 TRMT61AQ96FX7 289 aaKnown RBP16.11■□□□□ 0.17
SQLE-201ENST00000265896 HCFC1R1Q9NWW0 138 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 STOX2Q9P2F5 926 aaPredicted RBP16.11■□□□□ 0.17
SQLE-201ENST00000265896 PCDHGB6Q9Y5F9 930 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 CSF2P04141 144 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 ARMCX6Q7L4S7 300 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 WDR20Q8TBZ3 569 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 MGLLQ99685 303 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 MMP28Q9H239 520 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 CCNB1IP1Q9NPC3 277 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 ASIC5Q9NY37 505 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 CXCR4P61073 352 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 SELENOWP63302 87 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 IFITM2Q01629 132 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 CNTN1Q12860 1018 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 MPEG1Q2M385 716 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 TRIM60Q495X7 471 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 CCDC92Q53HC0 331 aaPredicted RBP16.11■□□□□ 0.17
SQLE-201ENST00000265896 IGSF21Q96ID5 467 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 CEP295NLQ96MC4 621 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 PSD2Q9BQI7 771 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 PCDHGA2Q9Y5H1 932 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 SNX11Q9Y5W9 270 aa16.11■□□□□ 0.17
SQLE-201ENST00000265896 MYO10Q9HD67 2058 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.1■□□□□ 0.17
SQLE-201ENST00000265896 NTN1O95631 604 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 GRK3P35626 688 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 CAV3P56539 151 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms