RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ADNP2Q6IQ32 1131 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 OR52E4Q8NGH9 312 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 OR5P2Q8WZ92 322 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 CCM2LQ9NUG4 571 aaPredicted RBP13.49□□□□□ -0.25
CDH3-201ENST00000264012 GIN1Q9NXP7 522 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 PCDHB3Q9Y5E6 796 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 ITGB4P16144 1822 aa13.49□□□□□ -0.25
CDH3-201ENST00000264012 H3BSA7 217 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 SMAD6O43541 496 aaKnown RBP13.48□□□□□ -0.25
CDH3-201ENST00000264012 KLHL18O94889 574 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 CD2P06729 351 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 GNALP38405 381 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 CST6Q15828 149 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 KIAA1614Q5VZ46 1190 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 CCDC116Q8IYX3 515 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 MEIOBQ8N635 442 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 ANKRA2Q9H9E1 313 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 CYP8B1Q9UNU6 501 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 TCRBV21S2A2A0A5A6 115 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 CPNE3O75131 537 aaKnown RBP13.48□□□□□ -0.25
CDH3-201ENST00000264012 ZNF3P17036 446 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 DEFB103AP81534 67 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 ATP6AP1Q15904 470 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 C18orf21Q32NC0 220 aaPredicted RBP13.48□□□□□ -0.25
CDH3-201ENST00000264012 ARHGAP40Q5TG30 622 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 PRPF38BQ5VTL8 546 aaKnown RBP13.48□□□□□ -0.25
CDH3-201ENST00000264012 SLC25A24Q6NUK1 477 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 SLC29A4Q7RTT9 530 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 OR4K14Q8NGD5 310 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 MAPK15Q8TD08 544 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 SMPDL3BQ92485 455 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 CRELD1Q96HD1 420 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 A0A0U1RQS6 177 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 PCDHGA12O60330 932 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 CH25HO95992 272 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 IFNA6P05013 189 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 KCNA5P22460 613 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 HTR6P50406 440 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 LBX1P52954 281 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 CST9Q5W186 159 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 RIT1Q92963 219 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 KLF16Q9BXK1 252 aaPredicted RBP13.48□□□□□ -0.25
CDH3-201ENST00000264012 MTG2Q9H4K7 406 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 PLEKHA1Q9HB21 404 aa13.48□□□□□ -0.25
CDH3-201ENST00000264012 PTBP2Q9UKA9 531 aaKnown RBP13.48□□□□□ -0.25
CDH3-201ENST00000264012 NPIPB15A6NHN6 443 aaPredicted RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 SCDO00767 359 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 TLX2O43763 284 aaPredicted RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 LDOC1O95751 146 aaPredicted RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 EPCAMP16422 314 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 TGFBR2P37173 567 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 ERVPABLB-1P60509 514 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 GPR150Q8NGU9 434 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 PTERQ96BW5 349 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 MVB12BQ9H7P6 319 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 TNFRSF10DQ9UBN6 386 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 GON4LQ3T8J9 2241 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 ADAMTS4O75173 837 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 CCNKO75909 580 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 PFKLP17858 780 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 RAB25P57735 213 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 DECR1Q16698 335 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 SETD7Q8WTS6 366 aaKnown RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 PIK3R3Q92569 461 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 F2RL3Q96RI0 385 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 CLSTN3Q9BQT9 956 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 RC3H2Q9HBD1 1191 aaKnown RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 SLC35C2Q9NQQ7 365 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 COMMD3Q9UBI1 195 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 GJD2Q9UKL4 321 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 URB1O60287 2271 aaKnown RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 C2orf74A8MZ97 194 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 C9J4A7 227 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 HRH2P25021 359 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 KDELR2P33947 212 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 CLDN8P56748 225 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 PPP3R1P63098 170 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 HACD2Q6Y1H2 254 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 BTN2A1Q7KYR7 527 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 NRROSQ86YC3 692 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 HUS1BQ8NHY5 278 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 CD200R1Q8TD46 325 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 NARS2Q96I59 477 aaKnown RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 DPH7Q9BTV6 452 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 DHRS4Q9BTZ2 278 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 TCF7L1Q9HCS4 588 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 HCFC1R1Q9NWW0 138 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 GMEB2Q9UKD1 530 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 RBM7Q9Y580 266 aaKnown RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 FABP12A6NFH5 140 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 ANXA2P2A6NMY6 339 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 EIF3FO00303 357 aaPredicted RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 ANXA2P07355 339 aaKnown RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 ADRB3P13945 408 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 AGXTP21549 392 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 BMP8BP34820 402 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 RORCP51449 518 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 WDR5P61964 334 aaKnown RBP13.47□□□□□ -0.25
CDH3-201ENST00000264012 FADDQ13158 208 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 E2F2Q14209 437 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms