RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ARHGAP39Q9C0H5 1083 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.06□□□□□ -0.64
TROAP-201ENST00000257909 CHST8Q9H2A9 424 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 SLC32A1Q9H598 525 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 GLTPQ9NZD2 209 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 HCN4Q9Y3Q4 1203 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 CHD5Q8TDI0 1954 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 ALPK3Q96L96 1907 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 LINC00862A6NCI5 91 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 ZAR1LA6NP61 321 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 TMEM229AB2RXF0 380 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 MEN1O00255 615 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 MYL12BO14950 172 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 TSPAN3O60637 253 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 CDRT1O95170 752 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 ANXA5P08758 320 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 GSTM1P09488 218 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 PRKAR1AP10644 381 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 COX7A2P14406 83 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 MYL12AP19105 171 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 RRAS2P62070 204 aaPredicted RBP11.06□□□□□ -0.64
TROAP-201ENST00000257909 FAM189BP81408 668 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 MRPL28Q13084 256 aaKnown RBP11.06□□□□□ -0.64
TROAP-201ENST00000257909 C1DQ13901 141 aaKnown RBP11.06□□□□□ -0.64
TROAP-201ENST00000257909 ARHGEF7Q14155 803 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 NCF4Q15080 339 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 UGT8Q16880 541 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 ZNF772Q68DY9 489 aaPredicted RBP11.06□□□□□ -0.64
TROAP-201ENST00000257909 SDE2Q6IQ49 451 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 SYT12Q8IV01 421 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 BBS7Q8IWZ6 715 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 ESX1Q8N693 406 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 C11orf65Q8NCR3 313 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 FAM46DQ8NEK8 389 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 LRRC20Q8TCA0 184 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 KLHL6Q8WZ60 621 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 AP3S1Q92572 193 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 TMEM80Q96HE8 168 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 HDHD5Q9BXW7 423 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 SLC25A19Q9HC21 320 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 THSD1Q9NS62 852 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 RAI2Q9Y5P3 530 aa11.06□□□□□ -0.64
TROAP-201ENST00000257909 A0A0D9SEW6 157 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 PRR23AA6NEV1 266 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 PDGFAP04085 211 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 FHP07954 510 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 CTRB1P17538 263 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 AQP1P29972 269 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 MLLT11Q13015 90 aaPredicted RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 DOC2BQ14184 412 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 ELOAQ14241 798 aaKnown RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 SUZ12Q15022 739 aaKnown RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 ZNF648Q5T619 568 aaPredicted RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 ZBTB37Q5TC79 503 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 TRIQKQ629K1 86 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 FAM205BPQ63HN1 556 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 CTRB2Q6GPI1 263 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 CCSAPQ6IQ19 270 aaPredicted RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 RBFAQ8N0V3 343 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 SLC34A3Q8N130 599 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 ZBTB2Q8N680 514 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 LPPQ93052 612 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 TRMT61AQ96FX7 289 aaKnown RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 EXOC2Q96KP1 924 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 SAMD11Q96NU1 681 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 POLR2J2Q9GZM3 115 aaKnown RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 ANKRA2Q9H9E1 313 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 FZD3Q9NPG1 666 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 VPS4AQ9UN37 437 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 SLC6A14Q9UN76 642 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 PCDHGC4Q9Y5F7 938 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 ACTL7AQ9Y615 435 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 PLXNA3P51805 1871 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 SERTM1A2A2V5 107 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 ORC5O43913 435 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 TPST2O60704 377 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 NBNO60934 754 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 SLC43A1O75387 559 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 SLC25A14O95258 325 aaPredicted RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 SLC10A3P09131 477 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 NUDT7P0C024 238 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 HLA-EP13747 358 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 PTGS2P35354 604 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 SLC9A3P48764 834 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 TGM4P49221 684 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 CRISP1P54107 249 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 CLDN20P56880 219 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 MXD1Q05195 221 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 HNRNPA0Q13151 305 aaKnown RBP11.05□□□□□ -0.64
TROAP-201ENST00000257909 RGNQ15493 299 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 TJAP1Q5JTD0 557 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 CDKL4Q5MAI5 379 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 RNLSQ5VYX0 342 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 RGMBQ6NW40 437 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 MIB1Q86YT6 1006 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 TMC8Q8IU68 726 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 CLECL1Q8IZS7 167 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 UBE2J2Q8N2K1 259 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 PROKR2Q8NFJ6 384 aa11.05□□□□□ -0.64
TROAP-201ENST00000257909 OR9Q2Q8NGE9 314 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms