RNA–Protein interactions for RNA: ENST00000255152.2

ZSWIM3-201, Transcript of zinc finger SWIM-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZSWIM3, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3-201ENST00000255152 RUNDC3AQ59EK9 446 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 PHACTR4Q8IZ21 702 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 RHEBL1Q8TAI7 183 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 KCNC2Q96PR1 638 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 FICDQ9BVA6 458 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 C1QTNF6Q9BXI9 259 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 SLC25A37Q9NYZ2 338 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 PHF11Q9UIL8 331 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 NCKAP1Q9Y2A7 1128 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 SYNJ2BP-COX16A0A087WUM0 186 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 WASH4PA8MWX3 477 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 HNRNPCL2B2RXH8 293 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 BTN3A1O00481 513 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 SLC7A4O43246 635 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 RECQL4O94761 1208 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 HLA-EP13747 358 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 PSMA1P25786 263 aaKnown RBP12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 POU1F1P28069 291 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 CDH18Q13634 790 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 DMC1Q14565 340 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 MAPKAPK3Q16644 382 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 INTS6LQ5JSJ4 861 aaKnown RBP12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 FBXO47Q5MNV8 452 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 UBXN11Q5T124 520 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 ATG9BQ674R7 924 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 HSDL2Q6YN16 418 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 CHMP1BQ7LBR1 199 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 MSRB3Q8IXL7 192 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 Q8N402 240 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 MS4A15Q8N5U1 240 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 NPWQ8N729 165 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 OR6C4Q8NGE1 309 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 SLC25A46Q96AG3 418 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 FAM120BQ96EK7 910 aaKnown RBP12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 SCLYQ96I15 445 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 ATOH8Q96SQ7 321 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 MRPL45Q9BRJ2 306 aaKnown RBP12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 REEP1Q9H902 201 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 COX16Q9P0S2 106 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 CACNG4Q9UBN1 327 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 SEC14L4Q9UDX3 406 aa12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 DNMT3AQ9Y6K1 912 aaPredicted RBP12.53□□□□□ -0.4
ZSWIM3-201ENST00000255152 LOC102723532A0A0G2JNH3 316 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 CBX4O00257 560 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 ABCD4O14678 606 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 PER2O15055 1255 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 INPPL1O15357 1258 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 CACNG3O60359 315 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 MT-CYBP00156 380 aaPredicted RBP12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 CFDP00746 253 aaPredicted RBP12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 C9P02748 559 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 AFF1P51825 1210 aaKnown RBP12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 PTPN5P54829 565 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 CCL23P55773 120 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 BTG1P62324 171 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 PUDPQ08623 228 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 MBTPS1Q14703 1052 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 KIAA0040Q15053 153 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 LGALSLQ3ZCW2 172 aaPredicted RBP12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 MPP7Q5T2T1 576 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 Q6ZSR9 355 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 LUZP2Q86TE4 346 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 ACOT1Q86TX2 421 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 DEFB106AQ8N104 65 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 FBXO39Q8N4B4 442 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 PNPLA1Q8N8W4 532 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 ASB12Q8WXK4 309 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 KIF12Q96FN5 646 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 PAWRQ96IZ0 340 aaKnown RBP12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 ZFP42Q96MM3 310 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 HTATIP2Q9BUP3 242 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 PITHD1Q9GZP4 211 aaPredicted RBP12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 HHATLQ9HCP6 504 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 THUMPD1Q9NXG2 353 aaKnown RBP12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 EMC3Q9P0I2 261 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 ZNF222Q9UK12 451 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 CDH10Q9Y6N8 788 aa12.52□□□□□ -0.4
ZSWIM3-201ENST00000255152 MICAL3Q7RTP6 2002 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 FAM170BA6NMN3 283 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 WWP2O00308 870 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 QSOX1O00391 747 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 SYN3O14994 580 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 SCG5P05408 212 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 FABP3P05413 133 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 ANXA3P12429 323 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 HK1P19367 917 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 ITGB7P26010 798 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 APEX1P27695 318 aaKnown RBP12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 RECQLP46063 649 aaPredicted RBP12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 ZNF91Q05481 1191 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 MADCAM1Q13477 382 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 SF3A2Q15428 464 aaKnown RBP12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 TMEM107Q6UX40 140 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 TRIM69Q86WT6 500 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 CALHM3Q86XJ0 350 aa12.52□□□□□ -0.41
ZSWIM3-201ENST00000255152 SLC44A2Q8IWA5 706 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms