RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DGKBQ9Y6T7 804 aa18.73■□□□□ 0.59
CDC42EP1-201ENST00000249014 PFDN1O60925 122 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 CLPXO76031 633 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 KLK1P06870 262 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 HIST2H2ACQ16777 129 aaPredicted RBP18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 HIST2H2AA3Q6FI13 130 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 FAM71E1Q6IPT2 247 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 VN1R5Q7Z5H4 357 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 MMP21Q8N119 569 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 METTL4Q8N3J2 472 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 OR2L2Q8NH16 312 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 OR5AK3PQ8NH89 298 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 PPCDCQ96CD2 204 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 PITX2Q99697 317 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 SORBS1Q9BX66 1292 aaKnown RBP18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 MYNNQ9NPC7 610 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 ATAD3AQ9NVI7 634 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 TMEM98Q9Y2Y6 226 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 TESMINQ9Y4I5 508 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 DENND4AQ7Z401 1863 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 KIF26AQ9ULI4 1882 aaPredicted RBP18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 EDDM13A0A1B0GTR0 161 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 C17orf113A0A1B0GUU1 675 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 PCDHGA12O60330 932 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 GPR37L1O60883 481 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 WBP4O75554 376 aaKnown RBP18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 ZBTB11O95625 1053 aaPredicted RBP18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 C10orf62Q5T681 223 aaPredicted RBP18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 PLA2G15Q8NCC3 412 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 OR52N2Q8NGI0 321 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 APH1BQ8WW43 257 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 DPEP2Q9H4A9 486 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 ZDHHC4Q9NPG8 344 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 SCN3BQ9NY72 215 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 PCDHGB3Q9Y5G1 929 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 CORINQ9Y5Q5 1042 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 LYVE1Q9Y5Y7 322 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 AP1M2Q9Y6Q5 423 aa18.72■□□□□ 0.59
CDC42EP1-201ENST00000249014 PRAMEF25A6NGN4 478 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 HEPACAM2A8MVW5 462 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 MT-ND2P03891 347 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 KRT20P35900 424 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 RANBP1P43487 201 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 OR1E2P47887 323 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 C21orf59P57076 290 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 ELAVL3Q14576 367 aaKnown RBP18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 SLC5A12Q1EHB4 618 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 Q6ZPB1 254 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 SLC15A4Q8N697 577 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 C12orf76Q8N812 135 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 ZNF540Q8NDQ6 660 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 OR5AR1Q8NGP9 310 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 NFKBIDQ8NI38 313 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 MIPOL1Q8TD10 442 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 RORBQ92753 470 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 BADQ92934 168 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 ABTB1Q969K4 478 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 TAMM41Q96BW9 452 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 PLEKHA8Q96JA3 519 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 OR52A5Q9H2C5 316 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 C1GALT1Q9NS00 363 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 TBC1D23Q9NUY8 699 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 SPASTQ9UBP0 616 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 GPR34Q9UPC5 381 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 ASF1AQ9Y294 204 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 J3QRK9 145 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 SCARB2Q14108 478 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 ZNF234Q14588 700 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 GCNT6Q5T4J0 391 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 FAM180BQ6P0A1 224 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 Q6ZNX1 250 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 ENTHD1Q8IYW4 607 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 ZNF514Q96K75 400 aaPredicted RBP18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 GABARAPL3Q9BY60 117 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 MAP4K5Q9Y4K4 846 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 PCDHGA6Q9Y5G7 932 aa18.71■□□□□ 0.59
CDC42EP1-201ENST00000249014 LINC01553A4QN01 128 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 FAM20BO75063 409 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 PIK3CBP42338 1070 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 EEF1A2Q05639 463 aaKnown RBP18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 FCHO2Q0JRZ9 810 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 PROX2Q3B8N5 592 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 CYP27C1Q4G0S4 372 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 TMEM240Q5SV17 173 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 PRAMEF14Q5SWL7 426 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 PRAMEF13Q5VWM6 474 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 GPR153Q6NV75 609 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 CCDC81Q6ZN84 652 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 RNF130Q86XS8 419 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 MMAAQ8IVH4 418 aaKnown RBP18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 HRASLS5Q96KN8 279 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 KCNC2Q96PR1 638 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 ACAT2Q9BWD1 397 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 RHBDL2Q9NX52 303 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 DEC1Q9P2X7 70 aa18.7■□□□□ 0.58
CDC42EP1-201ENST00000249014 TNFRSF11BO00300 401 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 GABARAPO95166 117 aa18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 FADS2O95864 444 aaKnown RBP18.69■□□□□ 0.58
CDC42EP1-201ENST00000249014 IL3P08700 152 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms