RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PLXND1Q9Y4D7 1925 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 TSPAN11A1L157 253 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 TMEM247A6NEH6 219 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 CTNNB1P35222 781 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 BMPR1AP36894 532 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 OR1E2P47887 323 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 NTHL1P78549 312 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 IFITM3Q01628 133 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 MC1RQ01726 317 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 FPGSQ05932 587 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF763Q0D2J5 394 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 PPIGQ13427 754 aaKnown RBP eCLIP13.81□□□□□ -0.2
HIF3A-202ENST00000244303 E2F2Q14209 437 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 OXA1LQ15070 435 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 INAQ16352 499 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 DPPA4Q7L190 304 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 SYTL1Q8IYJ3 562 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 MFSD4AQ8N468 514 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF366Q8N895 744 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF784Q8NCA9 323 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-202ENST00000244303 POF1BQ8WVV4 589 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 ERLEC1Q96DZ1 483 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 SLC35A5Q9BS91 424 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 COPS4Q9BT78 406 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 MROQ9BYG7 248 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 BHLHE41Q9C0J9 482 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-202ENST00000244303 RAD18Q9NS91 495 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 GULP1Q9UBP9 304 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 ITM2BQ9Y287 266 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 AP1M2Q9Y6Q5 423 aa13.81□□□□□ -0.2
HIF3A-202ENST00000244303 H3BM21 787 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 SAP18O00422 153 aaKnown RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ADAMDEC1O15204 470 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 KDM1AO60341 852 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 CNOT3O75175 753 aaKnown RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 C1orf105O95561 183 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 C6orf47O95873 294 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ELFN1P0C7U0 828 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 WEE1P30291 646 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 DMC1Q14565 340 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 GRIN2CQ14957 1233 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 CCDC92Q53HC0 331 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF805Q5CZA5 627 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 UBE2UQ5VVX9 321 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 LIPIQ6XZB0 460 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 COMMD6Q7Z4G1 85 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 OR6Q1Q8NGQ2 317 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 OR52J3Q8NH60 311 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 PHF10Q8WUB8 498 aaKnown RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 CIDECQ96AQ7 238 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 REEP4Q9H6H4 257 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 RLIMQ9NVW2 624 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ATP6V1HQ9UI12 483 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 PNMA8BQ9ULN7 279 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 HCFC2Q9Y5Z7 792 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 KIF26AQ9ULI4 1882 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 CLDN24A6NM45 220 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 TNFRSF21O75509 655 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 C21orf33P30042 268 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 GRK3P35626 688 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 GGT2P36268 569 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 MMP12P39900 470 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 CD300CQ08708 224 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 SLBPQ14493 270 aaKnown RBP eCLIP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ZNF77Q15935 545 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 HIST2H2ACQ16777 129 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 SYT16Q17RD7 645 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ARMCX6Q7L4S7 300 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 SLC5A8Q8N695 610 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 OR10G2Q8NGC3 310 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 NFKBIDQ8NI38 313 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 SPPL3Q8TCT6 385 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 PROX1Q92786 737 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 SLC35B4Q969S0 331 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 REPS1Q96D71 796 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 CXorf40BQ96DE9 158 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ZSWIM3Q96MP5 696 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 WRAP53Q9BUR4 548 aaKnown RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ITPAQ9BY32 194 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 SLIRPQ9GZT3 109 aaKnown RBP13.8□□□□□ -0.2
HIF3A-202ENST00000244303 AMBNQ9NP70 447 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 TBC1D14Q9P2M4 693 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 ACSL6Q9UKU0 697 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 WNT6Q9Y6F9 365 aa13.8□□□□□ -0.2
HIF3A-202ENST00000244303 EFCAB9A8MZ26 197 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 TGFB1P01137 390 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 NPPBP16860 134 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 SYN1P17600 705 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 HOXD12P35452 270 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 LIPAP38571 399 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 NNMTP40261 264 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 CDH12P55289 794 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 SPIBQ01892 262 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 MEF2AQ02078 507 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-202ENST00000244303 LRRC74AQ0VAA2 488 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 FADDQ13158 208 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 SCARB2Q14108 478 aa13.79□□□□□ -0.2
HIF3A-202ENST00000244303 STARD3Q14849 445 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms