RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 OR56B2PQ8NGI1 322 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 HERPUD2Q9BSE4 406 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 CENPOQ9BU64 300 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 NPIPA2E9PIF3 369 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 NPIPA3F8WFD2 350 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 SCELO95171 688 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 GJA5P36382 358 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 PPP5CP53041 499 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 HEPACAMQ14CZ8 416 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 ZNF181Q2M3W8 571 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 PDE12Q6L8Q7 609 aaKnown RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 FAM198BQ6UWH4 519 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 SH3RF2Q8TEC5 729 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 TSACCQ96A04 125 aaPredicted RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 THOC3Q96J01 351 aaKnown RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 NPLQ9BXD5 320 aaPredicted RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 DUSP16Q9BY84 665 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 POLR2J3Q9H1A7 115 aaKnown RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 FAIMQ9NVQ4 179 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 CD300AQ9UGN4 299 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 PCDHA2Q9Y5H9 948 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 H2AFB2P0C5Z0 115 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 PSEN1P49768 467 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 RFTN2Q52LD8 501 aaPredicted RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 C9orf152Q5JTZ5 239 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 TSPAN33Q86UF1 283 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 C9orf43Q8TAL5 461 aaPredicted RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 TRIB2Q92519 343 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 NSMAFQ92636 917 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 FAM83CQ9BQN1 747 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 RCOR3Q9P2K3 495 aaPredicted RBP10.77□□□□□ -0.69
MSH6-201ENST00000234420 HPSEQ9Y251 543 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 CLUHO75153 1309 aa10.77□□□□□ -0.69
MSH6-201ENST00000234420 IFNA1P01562 189 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PRNPP04156 253 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 C8orf89P0DMQ9 161 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 RPS15P62841 145 aaKnown RBP10.76□□□□□ -0.69
MSH6-201ENST00000234420 ENPP2Q13822 863 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 GNMTQ14749 295 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 MEP1AQ16819 746 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 CATSPERGQ6ZRH7 1159 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 SHISA6Q6ZSJ9 500 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 RPLP0P6Q8NHW5 317 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PHOSPHO1Q8TCT1 267 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 KCTD13Q8WZ19 329 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 FAM83DQ9H4H8 585 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 LRRC19Q9H756 370 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 RAI2Q9Y5P3 530 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 CCL22O00626 93 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 HOXC8P31273 242 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 MAP2K3P46734 347 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 AARDQ4LEZ3 155 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 CRB2Q5IJ48 1285 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 IGFN1Q86VF2 1251 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 IQCKQ8N0W5 287 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PROKR2Q8NFJ6 384 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 COQ10AQ96MF6 247 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 FUNDC2Q9BWH2 189 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
MSH6-201ENST00000234420 SLA2Q9H6Q3 261 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PRDM9Q9NQV7 894 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 MAN2C1Q9NTJ4 1040 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 EXTL2Q9UBQ6 330 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 VWA7Q9Y334 891 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 GNRHRP30968 328 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 SEC23BQ15437 767 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PRRT3Q5FWE3 981 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 TMEM209Q96SK2 561 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 COPS8Q99627 209 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 SULT4A1Q9BR01 284 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 ZNF670Q9BS34 389 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 CCDC106Q9BWC9 280 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 QRSL1Q9H0R6 528 aaKnown RBP10.76□□□□□ -0.69
MSH6-201ENST00000234420 SYT4Q9H2B2 425 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 MRPL15Q9P015 296 aaKnown RBP10.76□□□□□ -0.69
MSH6-201ENST00000234420 FBXO5Q9UKT4 447 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 TLR6Q9Y2C9 796 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 RCCD1A6NED2 376 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 H7C417 338 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 MMP20O60882 483 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 C2P06681 752 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 RETP07949 1114 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 SLC1A2P43004 574 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 FAM189A2Q15884 450 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 FBXO43Q4G163 708 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PAMR1Q6UXH9 720 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 C15orf40Q8WUR7 153 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 HHIPQ96QV1 700 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 LRRN3E7EW58 273 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 ITM2AO43736 263 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 JUNP05412 331 aaKnown RBP10.76□□□□□ -0.69
MSH6-201ENST00000234420 PIM1P11309 404 aaPredicted RBP10.76□□□□□ -0.69
MSH6-201ENST00000234420 DCKP27707 260 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 IFI44LQ53G44 452 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 Q8N402 240 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 ARL14Q8N4G2 192 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 OR4K2Q8NGD2 314 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 LRRC58Q96CX6 371 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 FBXL20Q96IG2 436 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms