RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 OPN1SWP03999 348 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 MYL9P24844 172 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 OR1E2P47887 323 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 HMGA2P52926 109 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 SMARCB1Q12824 385 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 CHRNA6Q15825 494 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 TRIM60Q495X7 471 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 UBE2R2Q712K3 238 aaPredicted RBP13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 TTC9Q92623 222 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 COPS8Q99627 209 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 C11orf54Q9H0W9 315 aaPredicted RBP13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 SLC25A19Q9HC21 320 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 FZD3Q9NPG1 666 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 SNTG1Q9NSN8 517 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 ENOPH1Q9UHY7 261 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 OGDHLQ9ULD0 1010 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 HCN4Q9Y3Q4 1203 aa13.44□□□□□ -0.26
SCNN1A-201ENST00000228916 GLYATL1P3A0A0U1RQE8 302 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 LINC00854A0A1B0GVQ3 168 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 C1SP09871 688 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 JUPP14923 745 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 BPIP17213 487 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 SOX3P41225 446 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 ELOAQ14241 798 aaKnown RBP13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 SLC35F1Q5T1Q4 408 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 PTCHD4Q6ZW05 846 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 TCTE3Q8IZS6 198 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 NXPE1Q8N323 547 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 ZFAND1Q8TCF1 268 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 BTN2A2Q8WVV5 523 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 FAM129BQ96TA1 746 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 TTLL2Q9BWV7 592 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 RACGAP1Q9H0H5 632 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 CWH43Q9H720 699 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 ACER3Q9NUN7 267 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 RUVBL1Q9Y265 456 aaKnown RBP13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 GPSM3Q9Y4H4 160 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 MTMR11A4FU01 709 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 TRBC1P01850 177 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 KLKB1P03952 638 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 HNMTP50135 292 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 MVDP53602 400 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 BNC1Q01954 994 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 RUNX1T1Q06455 604 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 ZNF33BQ06732 778 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 MRPL58Q14197 206 aaKnown RBP13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 LARS2Q15031 903 aaKnown RBP13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 CDKN3Q16667 212 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 GPR33Q49SQ1 333 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 ATXN7L2Q5T6C5 722 aaPredicted RBP13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 LYPD8Q6UX82 237 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 CAMKMTQ7Z624 323 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 NPAS3Q8IXF0 933 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 LAS2Q8IYD9 372 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 FRMD6Q96NE9 622 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 VPS29Q9UBQ0 182 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 AFF4Q9UHB7 1163 aaKnown RBP13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 STUB1Q9UNE7 303 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 SLC22A14Q9Y267 594 aa13.43□□□□□ -0.26
SCNN1A-201ENST00000228916 GABRR3A8MPY1 467 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 PCDH17O14917 1159 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 GJB5O95377 273 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CSF3P09919 207 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 POU2F1P14859 743 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 PSMA1P25786 263 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 ERP29P30040 261 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CSTF2P33240 577 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CNR2P34972 360 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 ATP5C1P36542 298 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 RHOAP61586 193 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CEP78Q5JTW2 689 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 ZNF648Q5T619 568 aaPredicted RBP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 XKRXQ6PP77 449 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 TRAF7Q6Q0C0 670 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 GTPBP3Q969Y2 492 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 REPS1Q96D71 796 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 MAGEB10Q96LZ2 347 aaPredicted RBP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 GPR62Q9BZJ7 368 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 TMEM245Q9H330 911 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 RNF121Q9H920 327 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 DNAJC11Q9NVH1 559 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 GPATCH2Q9NW75 528 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 A0A1W2PQ67 120 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 HYKKA2RU49 373 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 AGAP14A8MT82 685 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 J3KTA2 159 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 SYN3O14994 580 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CSO75390 466 aaKnown RBP13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 LGI1O95970 557 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CYP17A1P05093 508 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 SLC10A3P09131 477 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 HLA-DMAP28067 261 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CCR7P32248 378 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 XCR1P46094 333 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 TGM4P49221 684 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CD83Q01151 205 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 DUSP4Q13115 394 aa13.42□□□□□ -0.26
SCNN1A-201ENST00000228916 CHIT1Q13231 466 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms