RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TBC1D1Q86TI0 1168 aaPredicted RBP13.38□□□□□ -0.27
GPN3-201ENST00000228827 CYP4X1Q8N118 509 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 HAS2Q92819 552 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 KIAA1191Q96A73 305 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 PTCHD1Q96NR3 888 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 BARD1Q99728 777 aaKnown RBP13.38□□□□□ -0.27
GPN3-201ENST00000228827 CAPS2Q9BXY5 557 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 KCNK13Q9HB14 408 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 PRM3Q9NNZ6 103 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 STMN3Q9NZ72 180 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 GPRC5BQ9NZH0 403 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 HECTD1Q9ULT8 2610 aa13.38□□□□□ -0.27
GPN3-201ENST00000228827 TRAV17A0A0B4J275 112 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 MAGEB17A8MXT2 336 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 SUPT3HB4E1H0 165 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 PSMD12O00232 456 aaPredicted RBP13.37□□□□□ -0.27
GPN3-201ENST00000228827 PRAMEF4O60810 478 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 SUPT3HO75486 399 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 RNF224P0DH78 156 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 SMIM10L1P0DMW3 83 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 CRABP2P29373 138 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 HNRNPH1P31943 449 aaKnown RBP13.37□□□□□ -0.27
GPN3-201ENST00000228827 GGT5P36269 586 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 STXBP1P61764 594 aaKnown RBP13.37□□□□□ -0.27
GPN3-201ENST00000228827 IRF9Q00978 393 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 DOC2AQ14183 400 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 PDK4Q16654 411 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 MROH9Q5TGP6 573 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 PRAMEF9Q5VWM5 478 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 ADNP2Q6IQ32 1131 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 FAM180AQ6UWF9 173 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 CA13Q8N1Q1 262 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 PDPRQ8NCN5 879 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 SSC4DQ8WTU2 575 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 GAL3ST3Q96A11 431 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 SMIM10Q96HG1 83 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 FAR2Q96K12 515 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 PSMG3-AS1Q96PY0 264 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 LPAR4Q99677 370 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 COL12A1Q99715 3063 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 NMRAL1Q9HBL8 299 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 IGSF5Q9NSI5 407 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 PTBP2Q9UKA9 531 aaKnown RBP13.37□□□□□ -0.27
GPN3-201ENST00000228827 ASB1Q9Y576 335 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 HEATR5BQ9P2D3 2071 aa13.37□□□□□ -0.27
GPN3-201ENST00000228827 LRIT2A6NDA9 550 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 ANKDD1BA6NHY2 528 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 A8MUA0 341 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 UBXN8O00124 270 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 ERI3O43414 337 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 PRMT3O60678 531 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 LTA4HP09960 611 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 RNH1P13489 461 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 MAOAP21397 527 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 SRSF11Q05519 484 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 EXT1Q16394 746 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 CDKL4Q5MAI5 379 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 ISCA2Q86U28 154 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 BEST3Q8N1M1 668 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 NOA1Q8NC60 698 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 ST6GALNAC3Q8NDV1 305 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 TTLQ8NG68 377 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 STAG3L4Q8TBR4 150 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 M1APQ8TC57 530 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 KCTD4Q8WVF5 259 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 FAR1Q8WVX9 515 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 IFT81Q8WYA0 676 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 NXNL1Q96CM4 212 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 MS4A6EQ96DS6 147 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 PTCD3Q96EY7 689 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 MMP25Q9NPA2 562 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 NINJ2Q9NZG7 142 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 NUDT4Q9NZJ9 180 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 MDC1Q14676 2089 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 OR5H15A6NDH6 313 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 E2F3O00716 465 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 MAN1A2O60476 641 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 EPORP19235 508 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 CD22P20273 847 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 PLA2G16P53816 162 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 SLC26A5P58743 744 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 IRF8Q02556 426 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 RUNX2Q13950 521 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 ACER2Q5QJU3 275 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 RPUSD3Q6P087 351 aaKnown RBP13.36□□□□□ -0.27
GPN3-201ENST00000228827 QSOX2Q6ZRP7 698 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 VN1R5Q7Z5H4 357 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 CRLF3Q8IUI8 442 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 MMGT1Q8N4V1 131 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 BCORP1Q8N888 145 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 SUN3Q8TAQ9 357 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 ZNF354BQ96LW1 612 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 ATOH8Q96SQ7 321 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 NPAS2Q99743 824 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 NT5DC2Q9H857 520 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 NECTIN3Q9NQS3 549 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 OLAHQ9NV23 265 aa13.36□□□□□ -0.27
GPN3-201ENST00000228827 ANKRD10Q9NXR5 420 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms