RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 RAB3IL1Q8TBN0 382 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 NT5CQ8TCD5 201 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 ZBTB9Q96C00 473 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 ABHD17AQ96GS6 310 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 PAIP2Q9BPZ3 127 aaKnown RBP12.97□□□□□ -0.33
UPK1A-201ENST00000222275 GATA5Q9BWX5 397 aaPredicted RBP12.97□□□□□ -0.33
UPK1A-201ENST00000222275 SLC29A3Q9BZD2 475 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 SPRTNQ9H040 489 aaPredicted RBP12.97□□□□□ -0.33
UPK1A-201ENST00000222275 GSTO2Q9H4Y5 243 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 ZBTB26Q9HCK0 441 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 CUTCQ9NTM9 273 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 PCDHGA6Q9Y5G7 932 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 FER1L5A0AVI2 2057 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 MDC1Q14676 2089 aaKnown RBP12.97□□□□□ -0.33
UPK1A-201ENST00000222275 PCSK5Q92824 1860 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 A0A088AWK7 358 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 TMEM114B3SHH9 223 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 NDUFS4O43181 175 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 LCMT2O60294 686 aaKnown RBP12.96□□□□□ -0.33
UPK1A-201ENST00000222275 CRCPO75575 148 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 DNAJB5O75953 348 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 PDGFAP04085 211 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF10P21506 573 aaPredicted RBP12.96□□□□□ -0.33
UPK1A-201ENST00000222275 CCR10P46092 362 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 ARFIP1P53367 373 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 PPP2R2AP63151 447 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 TRAF3Q13114 568 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 IL10RAQ13651 578 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 CPSF6Q16630 551 aaKnown RBP eCLIP12.96□□□□□ -0.33
UPK1A-201ENST00000222275 CRTC2Q53ET0 693 aaPredicted RBP12.96□□□□□ -0.33
UPK1A-201ENST00000222275 CHSY3Q70JA7 882 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 ABHD13Q7L211 337 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 VN1R4Q7Z5H5 301 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF740Q8NDX6 193 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 OR7G3Q8NG95 312 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 OR4F6Q8NGB9 312 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 NSUN5Q96P11 429 aaKnown RBP12.96□□□□□ -0.33
UPK1A-201ENST00000222275 EFHD1Q9BUP0 239 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 TRIM55Q9BYV6 548 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 ACTL8Q9H568 366 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 ELOVL6Q9H5J4 265 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 CLK4Q9HAZ1 481 aaKnown RBP12.96□□□□□ -0.33
UPK1A-201ENST00000222275 MID1IP1Q9NPA3 183 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 NMRK1Q9NWW6 199 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF490Q9ULM2 529 aaPredicted RBP12.96□□□□□ -0.33
UPK1A-201ENST00000222275 PPT2Q9UMR5 302 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 SLC22A7Q9Y694 548 aa12.96□□□□□ -0.33
UPK1A-201ENST00000222275 CCDC88CQ9P219 2028 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 A0A1B0GX78 115 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 CDC14CA4D256 554 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 MEN1O00255 615 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 FOXE1O00358 373 aaPredicted RBP12.95□□□□□ -0.34
UPK1A-201ENST00000222275 DSCR3O14972 297 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 NRP2O60462 931 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 PRAMEF4O60810 478 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 CHEK2O96017 543 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 SERPINE1P05121 402 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 SERPIND1P05546 499 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 PCNAP12004 261 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 CD22P20273 847 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 PTX3P26022 381 aaPredicted RBP12.95□□□□□ -0.34
UPK1A-201ENST00000222275 PTPN4P29074 926 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 HMOX2P30519 316 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 AVPR1BP47901 424 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 MPP2Q14168 576 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 RCN2Q14257 317 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 HERC3Q15034 1050 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 ZRSR2Q15696 482 aaKnown RBP12.95□□□□□ -0.34
UPK1A-201ENST00000222275 TMEM35AQ53FP2 167 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 PRAMEF9Q5VWM5 478 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 FRG2Q64ET8 278 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 ZNF385CQ66K41 422 aaPredicted RBP12.95□□□□□ -0.34
UPK1A-201ENST00000222275 ATG16L1Q676U5 607 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 TTLL10Q6ZVT0 673 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 PRICKLE2Q7Z3G6 844 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.95□□□□□ -0.34
UPK1A-201ENST00000222275 DSELQ8IZU8 1212 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 ANKRD53Q8N9V6 530 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 METTL6Q8TCB7 284 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 APOBEC4Q8WW27 367 aaKnown RBP12.95□□□□□ -0.34
UPK1A-201ENST00000222275 CCT6BQ92526 530 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 MR1Q95460 341 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 CMTM7Q96FZ5 175 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 CATSPER2Q96P56 530 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 FRG2BQ96QU4 278 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 MECRQ9BV79 373 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 ROGDIQ9GZN7 287 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 SPNS1Q9H2V7 528 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 ANKHQ9HCJ1 492 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 PFDN4Q9NQP4 134 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 RUVBL1Q9Y265 456 aaKnown RBP12.95□□□□□ -0.34
UPK1A-201ENST00000222275 FARSAQ9Y285 508 aaKnown RBP12.95□□□□□ -0.34
UPK1A-201ENST00000222275 RNF11Q9Y3C5 154 aa12.95□□□□□ -0.34
UPK1A-201ENST00000222275 WDR91A4D1P6 747 aa12.94□□□□□ -0.34
UPK1A-201ENST00000222275 H0YIG0 161 aa12.94□□□□□ -0.34
UPK1A-201ENST00000222275 ULK1O75385 1050 aa12.94□□□□□ -0.34
UPK1A-201ENST00000222275 HSD3B1P14060 373 aa12.94□□□□□ -0.34
UPK1A-201ENST00000222275 ALAS2P22557 587 aa12.94□□□□□ -0.34
UPK1A-201ENST00000222275 HSD3B2P26439 372 aa12.94□□□□□ -0.34
UPK1A-201ENST00000222275 GCGRP47871 477 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms