RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 MED30Q96HR3 178 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 NECTIN4Q96NY8 510 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 VPS35Q96QK1 796 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 BDH2Q9BUT1 245 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 KAT8Q9H7Z6 458 aaKnown RBP9.57□□□□□ -0.88
USP11-201ENST00000218348 THG1LQ9NWX6 298 aaKnown RBP9.57□□□□□ -0.88
USP11-201ENST00000218348 TAC3Q9UHF0 121 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 ZNF451Q9Y4E5 1061 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 SNX8Q9Y5X2 465 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 PCM1Q15154 2024 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 WASHC1A8K0Z3 465 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 NPC1O15118 1278 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 MITFO75030 526 aaPredicted RBP9.57□□□□□ -0.88
USP11-201ENST00000218348 SRPRAP08240 638 aaKnown RBP9.57□□□□□ -0.88
USP11-201ENST00000218348 NPPBP16860 134 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 SLC5A2P31639 672 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 CRATP43155 626 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 RPL5P46777 297 aaKnown RBP9.57□□□□□ -0.88
USP11-201ENST00000218348 HAAOP46952 286 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 HSPA13P48723 471 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 B2MP61769 119 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 PPP2R2BQ00005 443 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 TFF2Q03403 129 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 GBX1Q14549 363 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.57□□□□□ -0.88
USP11-201ENST00000218348 KIAA1211LQ6NV74 962 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 WASH2PQ6VEQ5 465 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 HMGN2P46Q86SG4 172 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 CARM1Q86X55 608 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 PROSER1Q86XN7 944 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 PTRH1Q86Y79 214 aaKnown RBP9.57□□□□□ -0.88
USP11-201ENST00000218348 TCAIMQ8N3R3 496 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 L3MBTL4Q8NA19 623 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 OR14C36Q8NHC7 312 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 HLA-CQ95604 372 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 OTUB1Q96FW1 271 aaPredicted RBP9.57□□□□□ -0.88
USP11-201ENST00000218348 ING2Q9H160 280 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 RMND5AQ9H871 391 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 TRIM39Q9HCM9 518 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 CD93Q9NPY3 652 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 SMPD3Q9NY59 655 aaPredicted RBP9.57□□□□□ -0.88
USP11-201ENST00000218348 COQ3Q9NZJ6 369 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 DYRK1BQ9Y463 629 aa9.57□□□□□ -0.88
USP11-201ENST00000218348 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 OR52A4PA6NMU1 304 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 PPM1DO15297 605 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 HOXC11O43248 304 aaPredicted RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 PCDH7O60245 1069 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 DEAF1O75398 565 aaPredicted RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 TRMUO75648 421 aaKnown RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 MYO1DO94832 1006 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 H6PDO95479 791 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 ITGB7P26010 798 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 TUBA4AP68366 448 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 PDGFRLQ15198 375 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 ATP6AP1Q15904 470 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 C21orf62-AS1Q17RA5 79 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 CAPN13Q6MZZ7 669 aaPredicted RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 ZDHHC13Q8IUH4 622 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 AADATQ8N5Z0 425 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 FRMD1Q8N878 549 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 GIMAP5Q96F15 307 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 UHRF1Q96T88 793 aaPredicted RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 DCUN1D5Q9BTE7 237 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 CUEDC1Q9NWM3 386 aaPredicted RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 CCDC88CQ9P219 2028 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 SCN2AQ99250 2005 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 SCN3AQ9NY46 2000 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 G3V2T6 193 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 TMX2-CTNND1H3BSU7 103 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 H7BY64 318 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 RPS26P62854 115 aaKnown RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 TAP2Q03519 686 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 TUBA3CQ13748 450 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 SIM2Q14190 667 aaPredicted RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 WSCD2Q2TBF2 565 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 ZNF385BQ569K4 471 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 CPTPQ5TA50 214 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 PXDC1Q5TGL8 231 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 TUBA3EQ6PEY2 450 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 ZNF557Q8N988 423 aaPredicted RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 WDR20Q8TBZ3 569 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 TFGQ92734 400 aaPredicted RBP9.56□□□□□ -0.88
USP11-201ENST00000218348 NELL1Q92832 810 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 SDCCAG3Q96C92 435 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 MAGED4Q96JG8 741 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 PRAP1Q96NZ9 151 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 DUSP26Q9BV47 211 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 ABCG4Q9H172 646 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 TMEM245Q9H330 911 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 MAP4K5Q9Y4K4 846 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 STON1Q9Y6Q2 735 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 PTGES3LE9PB15 166 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 AP2A2O94973 939 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 EPN2O95208 641 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 RAP2AP10114 183 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 PRPS2P11908 318 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 IL9P15248 144 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 OR1E2P47887 323 aa9.56□□□□□ -0.88
USP11-201ENST00000218348 TAS2R50P59544 299 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms