RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 DGKZQ13574 1117 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 DUOXA1Q1HG43 343 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 IQCHQ86VS3 1027 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 COMTD1Q86VU5 262 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 ZMIZ2Q8NF64 920 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SETD6Q8TBK2 473 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 BTBD1Q9H0C5 482 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 CDH7Q9ULB5 785 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 C3P01024 1663 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 A0A1W2PQL4 384 aaPredicted RBP10.11□□□□□ -0.79
VCL-201ENST00000211998 OR6C65A6NJZ3 312 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SSX4O60224 188 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 UBXN7O94888 489 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 ALAS2P22557 587 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 EVX2Q03828 476 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 GRIN2CQ14957 1233 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SPCS2Q15005 226 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 FUT10Q6P4F1 479 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 PRSS48Q7RTY5 328 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 TMC8Q8IU68 726 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 GTPBP8Q8N3Z3 284 aaPredicted RBP10.11□□□□□ -0.79
VCL-201ENST00000211998 ATP6V1C2Q8NEY4 427 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 GPR151Q8TDV0 419 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SLC22A17Q8WUG5 538 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 GPR22Q99680 433 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 MYOCQ99972 504 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 TXLNGYQ9BZA5 131 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 GOLGA2P5Q9HBQ8 144 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 APOBEC3GQ9HC16 384 aaKnown RBP10.11□□□□□ -0.79
VCL-201ENST00000211998 POT1Q9NUX5 634 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 CDH10Q9Y6N8 788 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SCAMP1O15126 338 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 ARPC5O15511 151 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 FLRT2O43155 660 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 PPP1R11O60927 126 aaPredicted RBP10.11□□□□□ -0.79
VCL-201ENST00000211998 CDK14O94921 469 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 EOMESO95936 686 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 PBX3P40426 434 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 MAP3K8P41279 467 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 NFKB2Q00653 900 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 TUBB3Q13509 450 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 BCL7AQ4VC05 210 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 HES5Q5TA89 166 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 ZSWIM9Q86XI8 627 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 C1orf127Q8N9H9 656 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 TBC1D15Q8TC07 691 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 SLC35A5Q9BS91 424 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 NAA50Q9GZZ1 169 aaKnown RBP10.11□□□□□ -0.79
VCL-201ENST00000211998 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.11□□□□□ -0.791e-12■■■■□ 19.7
VCL-201ENST00000211998 MRPL15Q9P015 296 aaKnown RBP10.11□□□□□ -0.79
VCL-201ENST00000211998 PSAT1Q9Y617 370 aa10.11□□□□□ -0.79
VCL-201ENST00000211998 TREHO43280 583 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 LCKP06239 509 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SPHARQ15513 63 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ESCO2Q56NI9 601 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SPANXN4Q5MJ08 99 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SFRP4Q6FHJ7 346 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 PAQR3Q6TCH7 311 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SLC36A4Q6YBV0 504 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 RBM23Q86U06 439 aaKnown RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 AUTS2Q8WXX7 1259 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 TFAP2CQ92754 450 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 MYRFLQ96LU7 910 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 NELL2Q99435 816 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 GAS2L1Q99501 681 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 ABCD2Q9UBJ2 740 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 FZD10Q9ULW2 581 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 MED31Q9Y3C7 131 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 PTPRJQ12913 1337 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 PLIN4Q96Q06 1357 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 MRC1P22897 1456 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 A0A1B0GVI7 797 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 POP4O95707 220 aaKnown RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 RETP07949 1114 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SSTR2P30874 369 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 CD79BP40259 229 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 VLDLRP98155 873 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ZNF648Q5T619 568 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 GALNT13Q8IUC8 556 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SPARTQ8N0X7 666 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 YIPF7Q8N8F6 280 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 TMEM185AQ8NFB2 350 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 OR14K1Q8NGZ2 314 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ZNF563Q8TA94 476 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SLC35G5Q96KT7 338 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ZNF597Q96LX8 424 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 OR4K3Q96R72 315 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 GLTPQ9NZD2 209 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 EVLQ9UI08 416 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 POLHQ9Y253 713 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SNX10Q9Y5X0 201 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 PRORSD1PA6NEY8 169 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 TFP02787 698 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 PDGFAP04085 211 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 S100PP25815 95 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 CMPK1P30085 196 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 IGFALSP35858 605 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 PSMD8P48556 350 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ATXN1P54253 815 aaKnown RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 CD47Q08722 323 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms