RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CAPN10Q9HC96 672 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 TM9SF3Q9HD45 589 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 ABCB9Q9NP78 766 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 CREBZFQ9NS37 354 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 TOR4AQ9NXH8 423 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 QPCTLQ9NXS2 382 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 TMEM9Q9P0T7 183 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 RPS6KA6Q9UK32 745 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 KLHL20Q9Y2M5 609 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 TANC1Q9C0D5 1861 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 PRAMEF33A0A0G2JMD5 474 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 PRAMEF10O60809 474 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 MMP20O60882 483 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 MAPK1P28482 360 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 GZMMP51124 257 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 CRYBA2P53672 197 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TMEM115Q12893 351 aaPredicted RBP14.48□□□□□ -0.09
EFNB1-201ENST00000204961 CDKN3Q16667 212 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 GPR33Q49SQ1 333 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 MPPE1Q53F39 396 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TMEM215Q68D42 235 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 NPAS3Q8IXF0 933 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 SLC34A3Q8N130 599 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 AQP11Q8NBQ7 271 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 PHF10Q8WUB8 498 aaKnown RBP14.48□□□□□ -0.09
EFNB1-201ENST00000204961 CLP1Q92989 425 aaKnown RBP14.48□□□□□ -0.09
EFNB1-201ENST00000204961 DSN1Q9H410 356 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 CWH43Q9H720 699 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 ASF1AQ9Y294 204 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 PCDHGA6Q9Y5G7 932 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TRBV23OR9-2A0A075B6M9 112 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TRBV5-3A0A0A0MS03 114 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF701M0R085 212 aaPredicted RBP14.48□□□□□ -0.09
EFNB1-201ENST00000204961 FRS3O43559 492 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 SOD2P04179 222 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 C7P10643 843 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 SSTR4P31391 388 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 SCARB2Q14108 478 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 DUSP7Q16829 419 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 C5orf22Q49AR2 442 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TERB1Q8NA31 727 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 XAGE5Q8WWM1 108 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TUBA1CQ9BQE3 449 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 YTHDF1Q9BYJ9 559 aaKnown RBP14.48□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF556Q9HAH1 456 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 KCNK12Q9HB15 430 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 EHD3Q9NZN3 535 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 SOBPA7XYQ1 873 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 LZTS3O60299 673 aaPredicted RBP14.48□□□□□ -0.09
EFNB1-201ENST00000204961 OR10H3O60404 316 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 JRKO75564 520 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 BCHEP06276 602 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 C8orf89P0DMQ9 161 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 JUPP14923 745 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 NRIP1P48552 1158 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TBPL1P62380 186 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 MLLT1Q03111 559 aaPredicted RBP14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TCEAL5Q5H9L2 206 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 PTCHD4Q6ZW05 846 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 TCAIMQ8N3R3 496 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 CELF2-AS1Q8N7Q2 184 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 SCAIQ8N9R8 606 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 OR2A12Q8NGT7 310 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 STARD8Q92502 1023 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 GGHQ92820 318 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 CCDC115Q96NT0 180 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 EQTNQ9NQ60 294 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 CLEC2DQ9UHP7 191 aa14.48□□□□□ -0.09
EFNB1-201ENST00000204961 PLXNA4Q9HCM2 1894 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 TRAV19A0A0A6YYK7 116 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 HIDE1A8MVS5 230 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 HYAL3O43820 417 aaPredicted RBP14.47□□□□□ -0.09
EFNB1-201ENST00000204961 ERAL1O75616 437 aaKnown RBP14.47□□□□□ -0.09
EFNB1-201ENST00000204961 MFN2O95140 757 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 KDM4DQ6B0I6 523 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 COMMD6Q7Z4G1 85 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 ANKRD13BQ86YJ7 626 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 C12orf76Q8N812 135 aaPredicted RBP14.47□□□□□ -0.09
EFNB1-201ENST00000204961 C11orf65Q8NCR3 313 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 PPCDCQ96CD2 204 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 FAM129BQ96TA1 746 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 SNTG1Q9NSN8 517 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 TMEM39AQ9NV64 488 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 KCNE2Q9Y6J6 123 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 POP4O95707 220 aaKnown RBP14.47□□□□□ -0.09
EFNB1-201ENST00000204961 CATP04040 527 aaKnown RBP14.47□□□□□ -0.09
EFNB1-201ENST00000204961 IL3P08700 152 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 ITIH1P19827 911 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 S100A5P33763 92 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 HOXC5Q00444 222 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 PRSS53Q2L4Q9 553 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 CALHM3Q86XJ0 350 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 PJA1Q8NG27 643 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 APH1BQ8WW43 257 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 ZSWIM3Q96MP5 696 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 F2RL3Q96RI0 385 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 WFDC6Q9BQY6 131 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 QRSL1Q9H0R6 528 aaKnown RBP14.47□□□□□ -0.09
EFNB1-201ENST00000204961 XKR8Q9H6D3 395 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 CERS4Q9HA82 394 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms