RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 LMO7DNF2Z398 122 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 SAP18O00422 153 aaKnown RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 HAT1O14929 419 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 LCMT2O60294 686 aaKnown RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 SDC3O75056 442 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 EEDO75530 441 aaKnown RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 RASSF9O75901 435 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 FTH1P19P0C7X4 201 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 TIA1P31483 386 aaKnown RBP eCLIP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 BCL6P41182 706 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 GRIA3P42263 894 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 RAP1GDS1P52306 607 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 DGKQP52824 942 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 CLNS1AP54105 237 aaKnown RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 PSME3P61289 254 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 TLR1Q15399 786 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 TIGD2Q4W5G0 525 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 BNC2Q6ZN30 1099 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 TRIM73Q86UV7 250 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 PAQR7Q86WK9 346 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 ZNF761Q86XN6 746 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 METTL4Q8N3J2 472 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 TBC1D19Q8N5T2 526 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 TTLQ8NG68 377 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 WDR48Q8TAF3 677 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 C11orf24Q96F05 449 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 MS4A8Q9BY19 250 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 CLMPQ9H6B4 373 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 FSCN3Q9NQT6 498 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 UCKL1Q9NWZ5 548 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 SIRT5Q9NXA8 310 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 AHSPQ9NZD4 102 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 MAP10Q9P2G4 905 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 LEF1Q9UJU2 399 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 CROTQ9UKG9 612 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 PRPF19Q9UMS4 504 aaKnown RBP12.53□□□□□ -0.4
PHGDH-221ENST00000641573 ENTPD2Q9Y5L3 495 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 SNX11Q9Y5W9 270 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 ZW10O43264 779 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 PCDH7O60245 1069 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 NOBOXO60393 691 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 PRMT3O60678 531 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 CLEC3AO75596 197 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 CIB2O75838 187 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 SEMA3DO95025 777 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 LRATO95237 230 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 TBX6O95947 436 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-221ENST00000641573 SYPP08247 313 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 ANXA4P09525 319 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-221ENST00000641573 BNC1Q01954 994 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 SLC5A12Q1EHB4 618 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 DEFB133Q30KQ1 61 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 DEPDC1Q5TB30 811 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 KHDRBS2Q5VWX1 349 aaKnown RBP12.52□□□□□ -0.41
PHGDH-221ENST00000641573 GALNT18Q6P9A2 607 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 PGM2L1Q6PCE3 622 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 OGFOD3Q6PK18 319 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 RIPOR1Q6ZS17 1223 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 COMMD6Q7Z4G1 85 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 C17orf82Q86X59 251 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-221ENST00000641573 C10orf67Q8IYJ2 551 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 EFCAB3Q8N7B9 438 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 MFSD9Q8NBP5 474 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 CDC26Q8NHZ8 85 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 CREB3L4Q8TEY5 395 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 EGLN2Q96KS0 407 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 TMEM74Q96NL1 305 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 F2RL3Q96RI0 385 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 UBL7Q96S82 380 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-221ENST00000641573 CDRT15Q96T59 188 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 SARGQ9BW04 601 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 IL1RL2Q9HB29 575 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 GID8Q9NWU2 228 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 HRASLS2Q9NWW9 162 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 SUSD2Q9UGT4 822 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 PCDHGA7Q9Y5G6 932 aa12.52□□□□□ -0.41
PHGDH-221ENST00000641573 APC2O95996 2303 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 OR5K3A6NET4 321 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 PPM1DO15297 605 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 TNFSF14O43557 240 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 AKAP10O43572 662 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 PDE5AO76074 875 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 FKBP9O95302 570 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 IL6P05231 212 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 SERPIND1P05546 499 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 CD59P13987 128 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 PRPS1L1P21108 318 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 GSTM2P28161 218 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 AHRP35869 848 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 ASMTP46597 345 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 FASLGP48023 281 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 SLC14A1Q13336 389 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 BIRC2Q13490 618 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 NFYCQ13952 458 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 ZIC1Q15915 447 aa12.51□□□□□ -0.41
PHGDH-221ENST00000641573 FAM174BQ3ZCQ3 159 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms