RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SLBPQ14493 270 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 ZBED5Q49AG3 693 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 LRRC23Q53EV4 343 aaPredicted RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 PAGE2BQ5JRK9 111 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 TMEM179BQ7Z7N9 219 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 PTOV1Q86YD1 416 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 LRRC56Q8IYG6 542 aaPredicted RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 OR10Q1Q8NGQ4 319 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 COQ8BQ96D53 544 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 NPLQ9BXD5 320 aaPredicted RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 EHD1Q9H4M9 534 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 TPT1P8Q9HAU6 139 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 IFT80Q9P2H3 777 aaPredicted RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 CA5BQ9Y2D0 317 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 TMEM265A0A087WTH1 108 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 TCRBV21S2A2A0A5A6 115 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 PCDH7O60245 1069 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 TRMUO75648 421 aaKnown RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 IDSP22304 550 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 TEAD1P28347 426 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 ACSL1P33121 698 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 KDELR2P33947 212 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 ANXA8L1Q5VT79 327 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 METRNLQ641Q3 311 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 THAP5Q7Z6K1 395 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 HIPK1Q86Z02 1210 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 C8orf59Q8N0T1 100 aaPredicted RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 C2orf73Q8N5S3 287 aaPredicted RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 PNPT1Q8TCS8 783 aaKnown RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 FAM3CQ92520 227 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 TBC1D20Q96BZ9 403 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 MBOAT4Q96T53 435 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 GAS2L1Q99501 681 aaPredicted RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 SH3GL3Q99963 347 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 AMBRA1Q9C0C7 1298 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 ING2Q9H160 280 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 IL1RAPQ9NPH3 570 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 SIRT5Q9NXA8 310 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 C3orf18Q9UK00 162 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 RPS6KA6Q9UK32 745 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 NDRG2Q9UN36 371 aaKnown RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 PLEKHM1Q9Y4G2 1056 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 GMEB1Q9Y692 573 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 C1orf226A1L170 272 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 PIPSLA2A3N6 862 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 KMOO15229 486 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 CEACAM5P06731 702 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 EFNA1P20827 205 aaPredicted RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 ELK4P28324 431 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 CLDN2P57739 230 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 BIRC2Q13490 618 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 DUS1LQ6P1R4 473 aaKnown RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 Q6ZS52 159 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 ZNF555Q8NEP9 628 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 FLCNQ8NFG4 579 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 SNX19Q92543 992 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 TFGQ92734 400 aaPredicted RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 CXorf40BQ96DE9 158 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 SPATA9Q9BWV2 254 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 PHF7Q9BWX1 381 aaPredicted RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 PREBQ9HCU5 417 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 DMRT3Q9NQL9 472 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 CCDC177Q9NQR7 707 aaPredicted RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 DDX18Q9NVP1 670 aaKnown RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 FZD4Q9ULV1 537 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 KCNK6Q9Y257 313 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 WDR37Q9Y2I8 494 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 TDRKHQ9Y2W6 561 aaKnown RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 U3KQV3 271 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 ACADMP11310 421 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 PRKACGP22612 351 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 PPIBP23284 216 aaKnown RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 YAP1P46937 504 aaKnown RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 TPMTP51580 245 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 CLCNKAP51800 687 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 ZNF763Q0D2J5 394 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 LRRC74AQ0VAA2 488 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 RPA4Q13156 261 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 KCNAB2Q13303 367 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 VEZF1Q14119 521 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 HIST2H2ACQ16777 129 aaPredicted RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 ANKRD34AQ69YU3 496 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 HIST2H2AA3Q6FI13 130 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 UNC5DQ6UXZ4 953 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 ERI1Q8IV48 349 aaKnown RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 SLC5A11Q8WWX8 675 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 DPH2Q9BQC3 489 aaPredicted RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 OSGEPL1Q9H4B0 414 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 SH3BP4Q9P0V3 963 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 MOSPD1Q9UJG1 213 aa14.47□□□□□ -0.09
TRIM3-215ENST00000639856 EXO1Q9UQ84 846 aaKnown RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 COLQQ9Y215 455 aaPredicted RBP14.47□□□□□ -0.09
TRIM3-215ENST00000639856 POM121BA6NF01 834 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 H0Y8X5 98 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 ZNF701M0R085 212 aaPredicted RBP14.46□□□□□ -0.09
TRIM3-215ENST00000639856 RNASET2O00584 256 aaKnown RBP14.46□□□□□ -0.09
TRIM3-215ENST00000639856 PI15O43692 258 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 HS6ST1O60243 411 aa14.46□□□□□ -0.09
TRIM3-215ENST00000639856 SEMG1P04279 462 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms