RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 PLXND1Q9Y4D7 1925 aa18.51■□□□□ 0.55
PCDHGB3-202ENST00000618934 NINQ8N4C6 2090 aa18.51■□□□□ 0.55
PCDHGB3-202ENST00000618934 C1orf105O95561 183 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 PCGF2P35227 344 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 ASMTP46597 345 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 BCAP31P51572 246 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 TBPL1P62380 186 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 RELAQ04206 551 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 PAGE2BQ5JRK9 111 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 CCDC149Q6ZUS6 474 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 SYTL1Q8IYJ3 562 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 SLC5A8Q8N695 610 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 ZNF740Q8NDX6 193 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 OR5AK3PQ8NH89 298 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 ALPK1Q96QP1 1244 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 EPYCQ99645 322 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 IL36AQ9UHA7 158 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 J3KTA2 159 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 SLC22A1O15245 554 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 ATP6V1G1O75348 118 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 BMP4P12644 408 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 HSD3B1P14060 373 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 HSD3B2P26439 372 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 MMP12P39900 470 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 SLC19A1P41440 591 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 SELENOWP63302 87 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 OCA2Q04671 838 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 SYT16Q17RD7 645 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 PROX2Q3B8N5 592 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 ZNF658BQ4V348 819 aaPredicted RBP18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 DPPA4Q7L190 304 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 PARS2Q7L3T8 475 aaKnown RBP18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 COMMD6Q7Z4G1 85 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 CCDC103Q8IW40 242 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 KLHDC8AQ8IYD2 350 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 CFAP206Q8IYR0 622 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 PROX1Q92786 737 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 TIFAQ96CG3 184 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 HRASLS5Q96KN8 279 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 TRIM39Q9HCM9 518 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 ADPRHL2Q9NX46 363 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 SLC6A14Q9UN76 642 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 B3GNT3Q9Y2A9 372 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 PTPRSQ13332 1948 aa18.5■□□□□ 0.55
PCDHGB3-202ENST00000618934 OR2A25A4D2G3 310 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 M0R129 80 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 PLK4O00444 970 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 ELFN1P0C7U0 828 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 CCL5P13501 91 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 PCSK2P16519 638 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 XPAP23025 273 aaPredicted RBP18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 HPCAL1P37235 193 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 CD300CQ08708 224 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 SLBPQ14493 270 aaKnown RBP eCLIP18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 ZNF805Q5CZA5 627 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 MED27Q6P2C8 311 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 PRSS48Q7RTY5 328 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 MFSD4AQ8N468 514 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 C11orf65Q8NCR3 313 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 TAMM41Q96BW9 452 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 NECTIN3Q9NQS3 549 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 PADI2Q9Y2J8 665 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 PCDHGB3Q9Y5G1 929 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 KCNE2Q9Y6J6 123 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 MTCL1Q9Y4B5 1905 aaKnown RBP18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 TSPAN11A1L157 253 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 TNFRSF11BO00300 401 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 TNFRSF21O75509 655 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 SOD1P00441 154 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 LIPAP38571 399 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 ST13P50502 369 aaKnown RBP18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 PCDH1Q08174 1060 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 ZNF846Q147U1 533 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 STARD3Q14849 445 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 SPIN4Q56A73 249 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 ANXA8L1Q5VT79 327 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 KIAA0907Q7Z7F0 614 aaPredicted RBP18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 VPS37AQ8NEZ2 397 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 NFKBIDQ8NI38 313 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 VMP1Q96GC9 406 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 TOX2Q96NM4 488 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 NIPSNAP1Q9BPW8 284 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 NEURL2Q9BR09 285 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 SLC35A5Q9BS91 424 aa18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 SORBS1Q9BX66 1292 aaKnown RBP18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.49■□□□□ 0.55
PCDHGB3-202ENST00000618934 UNC80Q8N2C7 3258 aa18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 ALPK3Q96L96 1907 aa18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 H3BM21 787 aa18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 RNASET2O00584 256 aaKnown RBP18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 SPINT1O43278 529 aa18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 CD36P16671 472 aa18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 TPP2P29144 1249 aaPredicted RBP18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 NUDT6P53370 316 aa18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 PPIGQ13427 754 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 C2orf73Q8N5S3 287 aaPredicted RBP18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 LGALS12Q96DT0 336 aa18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 ERLEC1Q96DZ1 483 aa18.48■□□□□ 0.55
PCDHGB3-202ENST00000618934 VPS35Q96QK1 796 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms