RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 UTP15Q8TED0 518 aaKnown RBP15.83■□□□□ 0.12
CBWD3-211ENST00000615061 CCT6BQ92526 530 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 PHF21BQ96EK2 531 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 WDR34Q96EX3 536 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 PTCD3Q96EY7 689 aaKnown RBP15.83■□□□□ 0.12
CBWD3-211ENST00000615061 RBCK1Q9BYM8 510 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 EHD1Q9H4M9 534 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 COPG2Q9UBF2 871 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 FETUBQ9UGM5 382 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 IQANK1A0A1B0GTG1 560 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 CCDC189A1A4V9 331 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 SMIM23A6NLE4 172 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 MKRN2OSH3BPM6 223 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 AGPSO00116 658 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 PEX12O00623 359 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 GALR3O60755 368 aaPredicted RBP15.82■□□□□ 0.12
CBWD3-211ENST00000615061 BMP10O95393 424 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 RBP1P09455 135 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 COL6A2P12110 1019 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 HSD17B3P37058 310 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 XCR1P46094 333 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 NAA30Q147X3 362 aaPredicted RBP15.82■□□□□ 0.12
CBWD3-211ENST00000615061 HERC3Q15034 1050 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 ERCC6LQ2NKX8 1250 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 TOR1AIP1Q5JTV8 583 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 COLEC12Q5KU26 742 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 MED25Q71SY5 747 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 PTRH1Q86Y79 214 aaKnown RBP15.82■□□□□ 0.12
CBWD3-211ENST00000615061 TMEM151AQ8N4L1 468 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 FDCSPQ8NFU4 85 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 MTBPQ96DY7 904 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 IP6K3Q96PC2 410 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 TGIF2Q9GZN2 237 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 SEMA3GQ9NS98 782 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 FBXL4Q9UKA2 621 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 MYO18BQ8IUG5 2567 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 A0A0G2JN53 185 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 SERPINA6P08185 405 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 SFTPCP11686 197 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 EPB42P16452 691 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 HNRNPH1P31943 449 aaKnown RBP15.82■□□□□ 0.12
CBWD3-211ENST00000615061 EMP2P54851 167 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 E2F2Q14209 437 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 TSNAXIP1Q2TAA8 658 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 CYP4X1Q8N118 509 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 OR11G2Q8NGC1 345 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 OR2W6PQ8NHA6 318 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 EPS8L3Q8TE67 593 aaKnown RBP15.82■□□□□ 0.12
CBWD3-211ENST00000615061 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.82■□□□□ 0.12
CBWD3-211ENST00000615061 PEX11GQ96HA9 241 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 CCDC77Q9BR77 488 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 EFCAB11Q9BUY7 163 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 C14orf105Q9NVL8 296 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 TMEM216Q9P0N5 145 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 MKL2Q9ULH7 1088 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 RELNP78509 3460 aa15.82■□□□□ 0.12
CBWD3-211ENST00000615061 A0A1W2PPM1 405 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 E2F3O00716 465 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 CDC123O75794 336 aaPredicted RBP15.81■□□□□ 0.12
CBWD3-211ENST00000615061 SMIM10L1P0DMW3 83 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 EEF1DP29692 281 aaKnown RBP15.81■□□□□ 0.12
CBWD3-211ENST00000615061 RRADP55042 308 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 PCBP2Q15366 365 aaKnown RBP eCLIP15.81■□□□□ 0.12
CBWD3-211ENST00000615061 TBCCQ15814 346 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 MINDY4Q4G0A6 757 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 RPS27LQ71UM5 84 aaKnown RBP15.81■□□□□ 0.12
CBWD3-211ENST00000615061 ABHD13Q7L211 337 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 GOLGA7Q7Z5G4 137 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 RNF175Q8N4F7 328 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 SMIM10Q96HG1 83 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 FER1L6-AS2Q96M78 137 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 MRPL57Q9BQC6 102 aaKnown RBP15.81■□□□□ 0.12
CBWD3-211ENST00000615061 SLC25A23Q9BV35 468 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 NUDT9Q9BW91 350 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 MRPL46Q9H2W6 279 aaKnown RBP15.81■□□□□ 0.12
CBWD3-211ENST00000615061 NT5DC2Q9H857 520 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 ANGPTL3Q9Y5C1 460 aa15.81■□□□□ 0.12
CBWD3-211ENST00000615061 LRIT2A6NDA9 550 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 ANKDD1BA6NHY2 528 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 CEACAM4O75871 244 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 HEXBP07686 556 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 PYGBP11216 843 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 CASP2P42575 452 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 C19orf57Q0VDD7 668 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 GTF2H2Q13888 395 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 LACTB2Q53H82 288 aaPredicted RBP15.8■□□□□ 0.12
CBWD3-211ENST00000615061 MFSD4BQ5TF39 518 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 TCTN3Q6NUS6 607 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 GTF2H2CQ6P1K8 395 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 MYLK4Q86YV6 388 aaPredicted RBP15.8■□□□□ 0.12
CBWD3-211ENST00000615061 CLEC1AQ8NC01 280 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 TTLQ8NG68 377 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 AENQ8WTP8 325 aaKnown RBP15.8■□□□□ 0.12
CBWD3-211ENST00000615061 NACC2Q96BF6 587 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 MS4A6EQ96DS6 147 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 NSUN5Q96P11 429 aaKnown RBP15.8■□□□□ 0.12
CBWD3-211ENST00000615061 VN1R1Q9GZP7 353 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 CHST10O43529 356 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 SH3BGRLO75368 114 aa15.8■□□□□ 0.12
CBWD3-211ENST00000615061 CLEC3AO75596 197 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms