RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 BTRCQ9Y297 605 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DTX4Q9Y2E6 619 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ORC6Q9Y5N6 252 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 UBIAD1Q9Y5Z9 338 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 COMMD10Q9Y6G5 202 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 AP1M2Q9Y6Q5 423 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 COL4A1P02462 1669 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF831Q5JPB2 1677 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MIA3Q5JRA6 1907 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF541Q9H0D2 1346 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ABCA3Q99758 1704 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 DOCK1Q14185 1865 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 A0A0U1RQS6 177 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR6C65A6NJZ3 312 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 A8MVJ9 347 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 A8MX80 341 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 A8MXK9 166 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 HNRNPCL2B2RXH8 293 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 K7ERI5 159 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 MYL12BO14950 172 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 INPPL1O15357 1258 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 AKR7A2O43488 359 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 XPNPEP2O43895 674 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 WBP4O75554 376 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPX5O75715 221 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RECQL5O94762 991 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR4F21O95013 312 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 STBD1O95210 358 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 WISP3O95389 354 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 AP2A1O95782 977 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PGK1P00558 417 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CST1P01037 141 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 TNNC2P02585 160 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 IFNA4P05014 189 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PRKCBP05771 671 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDK1P06493 297 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 HMBSP08397 361 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ODC1P11926 461 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 COL6A1P12109 1028 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 HOXB8P17481 243 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 MYL12AP19105 171 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 MSH3P20585 1137 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 C4BPBP20851 252 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 KELP23276 732 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 GADD45AP24522 165 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYP2F1P24903 491 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 TM4SF1P30408 202 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 YWHABP31946 246 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CA5AP35218 305 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCR10P46092 362 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 GLRBP48167 497 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 NRIP1P48552 1158 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RGS6P49758 472 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RORCP51449 518 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CLCNKAP51800 687 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDH8P55286 799 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAG2P55895 527 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAB14P61106 215 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 LSM3P62310 102 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PSPHP78330 225 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 IRF9Q00978 393 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 IL5RAQ01344 420 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF91Q05481 1191 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF33AQ06730 810 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAP4K2Q12851 820 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ITPK1Q13572 414 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAPSNQ13702 412 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 NFYCQ13952 458 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF169Q14929 603 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PAFAH1B3Q15102 231 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 LTB4RQ15722 352 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF79Q15937 498 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 DUSP6Q16828 381 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 TIGD6Q17RP2 521 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM83EQ2M2I3 478 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 SMTNL2Q2TAL5 461 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 VPS26BQ4G0F5 336 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 USP39Q53GS9 565 aaKnown RBP3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PYCR3Q53H96 274 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 UNC50Q53HI1 259 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZMAT1Q5H9K5 638 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PABPC1L2AQ5JQF8 200 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PITRM1Q5JRX3 1037 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 LDLRAD1Q5T700 205 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAP1GAP2Q684P5 730 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 LAIR1Q6GTX8 287 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 ELP2Q6IA86 826 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR4F3Q6IEY1 312 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 CASC4Q6P4E1 433 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 PLET1Q6UQ28 207 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 LAYNQ6UX15 382 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMEM107Q6UX40 140 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 DLEU7Q6UYE1 221 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMPRSS11AQ6ZMR5 421 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 USP45Q70EL2 814 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 KCTD1Q719H9 257 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 KDELC2Q7Z4H8 507 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR149Q86SP6 731 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 RNF180Q86T96 592 aa3.92□□□□□ -1.78
HMGB1P50-201ENST00000605814 DPP9Q86TI2 863 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms