RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 URADA6NGE7 173 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 AGPSO00116 658 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 PEX12O00623 359 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 SOCS6O14544 535 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 PRAMEF4O60810 478 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
LSM4-206ENST00000600289 STATHP02808 62 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 SERPINA6P08185 405 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 RBP1P09455 135 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 GLRBP48167 497 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 RIPPLY3P57055 190 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 FOXL2P58012 376 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 HYAL2Q12891 473 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 LAPTM5Q13571 262 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 SLBPQ14493 270 aaKnown RBP eCLIP15.32■□□□□ 0.04
LSM4-206ENST00000600289 PCBP2Q15366 365 aaKnown RBP eCLIP15.32■□□□□ 0.04
LSM4-206ENST00000600289 IGFBP7Q16270 282 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 PRAMEF9Q5VWM5 478 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 PDSS2Q86YH6 399 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 TMEM151BQ8IW70 566 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 ZC3H7AQ8IWR0 971 aaKnown RBP15.32■□□□□ 0.04
LSM4-206ENST00000600289 OR9A4Q8NGU2 314 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 CREB3L4Q8TEY5 395 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 ESAMQ96AP7 390 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 MOCOSQ96EN8 888 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 VPS50Q96JG6 964 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 MACROD1Q9BQ69 325 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 CRB3Q9BUF7 120 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 RHBGQ9H310 441 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 SOX17Q9H6I2 414 aaPredicted RBP15.32■□□□□ 0.04
LSM4-206ENST00000600289 ACSS2Q9NR19 701 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 P4HTMQ9NXG6 502 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 PSMC3IPQ9P2W1 217 aaPredicted RBP15.32■□□□□ 0.04
LSM4-206ENST00000600289 OPTCQ9UBM4 332 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 PCDHGB7Q9Y5F8 929 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 CSMD1Q96PZ7 3565 aa15.32■□□□□ 0.04
LSM4-206ENST00000600289 IQANK1A0A1B0GTG1 560 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 CCNT2O60583 730 aaKnown RBP15.31■□□□□ 0.04
LSM4-206ENST00000600289 GALR3O60755 368 aaPredicted RBP15.31■□□□□ 0.04
LSM4-206ENST00000600289 CLEC3AO75596 197 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 WFS1O76024 890 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 KLHL18O94889 574 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 SMIM10L1P0DMW3 83 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 ALOX12P18054 663 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 IL1RNP18510 177 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 IL10P22301 178 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 DOC2AQ14183 400 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 RASA2Q15283 850 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 RBBP5Q15291 538 aaKnown RBP15.31■□□□□ 0.04
LSM4-206ENST00000600289 LACTB2Q53H82 288 aaPredicted RBP15.31■□□□□ 0.04
LSM4-206ENST00000600289 FBXO48Q5FWF7 155 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 VWA2Q5GFL6 755 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 PAGE2BQ5JRK9 111 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 DCAF10Q5QP82 559 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 ABHD13Q7L211 337 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 PRSS41Q7RTY9 318 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.31■□□□□ 0.04
LSM4-206ENST00000600289 SNX31Q8N9S9 440 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 ZCCHC10Q8TBK6 192 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 ACMSDQ8TDX5 336 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 UTP15Q8TED0 518 aaKnown RBP15.31■□□□□ 0.04
LSM4-206ENST00000600289 MZB1Q8WU39 189 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 SMIM10Q96HG1 83 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 CCDC77Q9BR77 488 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 C3orf18Q9UK00 162 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 NAALAD2Q9Y3Q0 740 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 TNPO3Q9Y5L0 923 aaKnown RBP15.31■□□□□ 0.04
LSM4-206ENST00000600289 DOCK10Q96BY6 2186 aa15.31■□□□□ 0.04
LSM4-206ENST00000600289 IDSB3KWA1 339 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 STX16-NPEPL1H3BU86 382 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 STX16O14662 325 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 KLHL41O60662 606 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 DNAJB5O75953 348 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 BMP10O95393 424 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 GFAPP14136 432 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 EPB42P16452 691 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 POU3F2P20265 443 aaPredicted RBP15.3■□□□□ 0.04
LSM4-206ENST00000600289 CD22P20273 847 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 HPDP32754 393 aaPredicted RBP15.3■□□□□ 0.04
LSM4-206ENST00000600289 PIK3CGP48736 1102 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 AGTR2P50052 363 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 IRF8Q02556 426 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 CHAF1BQ13112 559 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 RBBP7Q16576 425 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 ADPRMQ3LIE5 342 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 XKR6Q5GH73 641 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 WDR93Q6P2C0 686 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 KIRREL2Q6UWL6 708 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 TDRPQ86YL5 185 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 HPS6Q86YV9 775 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 LAS2Q8IYD9 372 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 CPAMD8Q8IZJ3 1885 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 OR51Q1Q8NH59 317 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 GAL3ST3Q96A11 431 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 OR1F2PQ96R84 312 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 MRPL57Q9BQC6 102 aaKnown RBP15.3■□□□□ 0.04
LSM4-206ENST00000600289 MRPL46Q9H2W6 279 aaKnown RBP15.3■□□□□ 0.04
LSM4-206ENST00000600289 ZNF358Q9NW07 568 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 XPR1Q9UBH6 696 aa15.3■□□□□ 0.04
LSM4-206ENST00000600289 ITPR3Q14573 2671 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms