RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 WFDC11Q8NEX6 87 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 NLGN4YQ8NFZ3 816 aaPredicted RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 OR13H1Q8NG92 308 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 OR7A2PQ8NGA2 310 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 OR6Q1Q8NGQ2 317 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 OR13J1Q8NGT2 312 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 OR6B3Q8NGW1 331 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 ANGPTL6Q8NI99 470 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 GABPB2Q8TAK5 448 aaPredicted RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 KCTD4Q8WVF5 259 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 CENPIQ92674 756 aaPredicted RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 KLK6Q92876 244 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 POP5Q969H6 163 aaKnown RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 TRIM63Q969Q1 353 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 PNPLA2Q96AD5 504 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 FKBP10Q96AY3 582 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 SDCCAG3Q96C92 435 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 L3HYPDHQ96EM0 354 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 RNF31Q96EP0 1072 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 AURKBQ96GD4 344 aaPredicted RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 MED30Q96HR3 178 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 ELMO2Q96JJ3 720 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 ZBTB45Q96K62 511 aaPredicted RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 TAAR9Q96RI9 348 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 TWNKQ96RR1 684 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 VAT1Q99536 393 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 BDH2Q9BUT1 245 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 FUNDC2Q9BWH2 189 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 LHPPQ9H008 270 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 LRRN3Q9H3W5 708 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 EPS8L2Q9H6S3 715 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 CAB39LQ9H9S4 337 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 CCDC177Q9NQR7 707 aaPredicted RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 GPATCH2LQ9NWQ4 482 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 BFARQ9NZS9 450 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 CCDC167Q9P0B6 97 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 MARK1Q9P0L2 795 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 KLHL8Q9P2G9 620 aaPredicted RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 HMGXB4Q9UGU5 601 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 TSPAN16Q9UKR8 245 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 TRHDEQ9UKU6 1024 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 BAG5Q9UL15 447 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 STAP1Q9ULZ2 295 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 UBQLN1Q9UMX0 589 aaKnown RBP4.01□□□□□ -1.77
LIG3-211ENST00000588713 AURKCQ9UQB9 309 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 ACOT9Q9Y305 439 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 UGT2A1Q9Y4X1 527 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 RNF215Q9Y6U7 377 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 RYR3Q15413 4870 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 PKD1L1Q8TDX9 2849 aa4.01□□□□□ -1.77
LIG3-211ENST00000588713 SCN8AQ9UQD0 1980 aa4□□□□□ -1.77
LIG3-211ENST00000588713 ANAPC1Q9H1A4 1944 aa4□□□□□ -1.77
LIG3-211ENST00000588713 A0A0J9YYE9 177 aa4□□□□□ -1.77
LIG3-211ENST00000588713 A0A1B0GUH1 482 aa4□□□□□ -1.77
LIG3-211ENST00000588713 A6NJY4 79 aa4□□□□□ -1.77
LIG3-211ENST00000588713 A8MT66 165 aa4□□□□□ -1.77
LIG3-211ENST00000588713 ZNF99A8MXY4 864 aaPredicted RBP4□□□□□ -1.77
LIG3-211ENST00000588713 TTC34A8MYJ7 566 aa4□□□□□ -1.77
LIG3-211ENST00000588713 TMEM233B4DJY2 109 aa4□□□□□ -1.77
LIG3-211ENST00000588713 PRAMEF26H0Y7S4 382 aa4□□□□□ -1.77
LIG3-211ENST00000588713 SLC1A7O00341 560 aa4□□□□□ -1.77
LIG3-211ENST00000588713 NR5A2O00482 541 aa4□□□□□ -1.77
LIG3-211ENST00000588713 AURKAO14965 403 aa4□□□□□ -1.77
LIG3-211ENST00000588713 INPP4BO15327 924 aa4□□□□□ -1.77
LIG3-211ENST00000588713 SLC31A1O15431 190 aa4□□□□□ -1.77
LIG3-211ENST00000588713 LATO43561 262 aa4□□□□□ -1.77
LIG3-211ENST00000588713 BCAS1O75363 584 aaPredicted RBP4□□□□□ -1.77
LIG3-211ENST00000588713 GPC4O75487 556 aa4□□□□□ -1.77
LIG3-211ENST00000588713 EEDO75530 441 aaKnown RBP4□□□□□ -1.77
LIG3-211ENST00000588713 MYO1DO94832 1006 aa4□□□□□ -1.77
LIG3-211ENST00000588713 SEC24DO94855 1032 aaPredicted RBP4□□□□□ -1.77
LIG3-211ENST00000588713 MAP3K6O95382 1288 aa4□□□□□ -1.77
LIG3-211ENST00000588713 KRT75O95678 551 aa4□□□□□ -1.77
LIG3-211ENST00000588713 NPPAP01160 153 aa4□□□□□ -1.77
LIG3-211ENST00000588713 ALPLP05186 524 aa4□□□□□ -1.77
LIG3-211ENST00000588713 GSNP06396 782 aa4□□□□□ -1.77
LIG3-211ENST00000588713 ENO2P09104 434 aaPredicted RBP4□□□□□ -1.77
LIG3-211ENST00000588713 RBP1P09455 135 aa4□□□□□ -1.77
LIG3-211ENST00000588713 TRAPPC2P0DI81 140 aa4□□□□□ -1.77
LIG3-211ENST00000588713 TRAPPC2BP0DI82 140 aa4□□□□□ -1.77
LIG3-211ENST00000588713 ITGAMP11215 1152 aa4□□□□□ -1.77
LIG3-211ENST00000588713 STMN1P16949 149 aa4□□□□□ -1.77
LIG3-211ENST00000588713 PAMP19021 973 aa4□□□□□ -1.77
LIG3-211ENST00000588713 CYP3A5P20815 502 aa4□□□□□ -1.77
LIG3-211ENST00000588713 PCMT1P22061 227 aa4□□□□□ -1.77
LIG3-211ENST00000588713 GPX3P22352 226 aa4□□□□□ -1.77
LIG3-211ENST00000588713 PAX3P23760 479 aa4□□□□□ -1.77
LIG3-211ENST00000588713 EEF1B2P24534 225 aaKnown RBP4□□□□□ -1.77
LIG3-211ENST00000588713 RPL10P27635 214 aaKnown RBP4□□□□□ -1.77
LIG3-211ENST00000588713 HTR1BP28222 390 aa4□□□□□ -1.77
LIG3-211ENST00000588713 SHMT2P34897 504 aa4□□□□□ -1.77
LIG3-211ENST00000588713 POLR2IP36954 125 aaKnown RBP4□□□□□ -1.77
LIG3-211ENST00000588713 SLC26A3P40879 764 aa4□□□□□ -1.77
LIG3-211ENST00000588713 RPL34P49207 117 aaKnown RBP4□□□□□ -1.77
LIG3-211ENST00000588713 GSK3BP49841 420 aa4□□□□□ -1.77
LIG3-211ENST00000588713 NDST1P52848 882 aa4□□□□□ -1.77
LIG3-211ENST00000588713 PPP5CP53041 499 aa4□□□□□ -1.77
LIG3-211ENST00000588713 ARSFP54793 590 aa4□□□□□ -1.77
LIG3-211ENST00000588713 GP2P55259 537 aaKnown RBP4□□□□□ -1.77
LIG3-211ENST00000588713 CLDN2P57739 230 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms