RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ADPGKQ9BRR6 497 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 SYNCQ9H7C4 482 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 ZWILCHQ9H900 591 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 SCPEP1Q9HB40 452 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 EIF2B3Q9NR50 452 aaKnown RBP2.41□□□□□ -2.02
VAPA-208ENST00000584796 RCC2Q9P258 522 aaKnown RBP2.41□□□□□ -2.02
VAPA-208ENST00000584796 CNOT8Q9UFF9 292 aaKnown RBP2.41□□□□□ -2.02
VAPA-208ENST00000584796 FBXW11Q9UKB1 542 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 ANGPTL2Q9UKU9 493 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 ISY1Q9ULR0 285 aaKnown RBP2.41□□□□□ -2.02
VAPA-208ENST00000584796 DUSP12Q9UNI6 340 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 TMEM5Q9Y2B1 443 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 EXOC6BQ9Y2D4 811 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 SNX8Q9Y5X2 465 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 MYOFQ9NZM1 2061 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 DNHD1Q96M86 4753 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 PCDH15Q96QU1 1955 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 USP9YO00507 2555 aaPredicted RBP2.41□□□□□ -2.02
VAPA-208ENST00000584796 SETD2Q9BYW2 2564 aaPredicted RBP2.41□□□□□ -2.02
VAPA-208ENST00000584796 FBN2P35556 2912 aa2.41□□□□□ -2.02
VAPA-208ENST00000584796 NUP210Q8TEM1 1887 aaPredicted RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 hCG_1807616A0A1W2PRN6 198 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 EIF3CLB5ME19 914 aaKnown RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 AP3D1O14617 1153 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 GCNT3O95395 438 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 HSPA4LO95757 839 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 GH1P01241 217 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 PTMAP06454 111 aaKnown RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 TRIM49P0CI25 452 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 TRIM49CP0CI26 452 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 GOLGA8HP0CJ92 632 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 IL11P20809 199 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 EPHA8P29322 1005 aaPredicted RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 ARL3P36405 182 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 TAS2R40P59535 323 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 CSTF1Q05048 431 aaKnown RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 CHAF1BQ13112 559 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 SCARB2Q14108 478 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 RASA2Q15283 850 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 TEAD2Q15562 447 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 ADIPOQQ15848 244 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 USH1GQ495M9 461 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 TMEM184AQ6ZMB5 413 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 CPLX4Q7Z7G2 160 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 PRPF39Q86UA1 669 aaKnown RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 AACSQ86V21 672 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 MARCH9Q86YJ5 346 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 ZNF713Q8N859 430 aaPredicted RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 TDRD5Q8NAT2 981 aaKnown RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 ZBTB44Q8NCP5 570 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 GMCL1P1Q8NEA9 526 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 SCFD2Q8WU76 684 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 RSPH1Q8WYR4 309 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 ATP6V0A1Q93050 837 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 P2RX5Q93086 422 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 TMEM143Q96AN5 459 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 SEPT5Q99719 369 aaPredicted RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 MRPL9Q9BYD2 267 aaKnown RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 SH2D4AQ9H788 454 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 EPB41L5Q9HCM4 733 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 DIAPH3Q9NSV4 1193 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 ADD3Q9UEY8 706 aaKnown RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 B3GALT5Q9Y2C3 310 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 SNX5Q9Y5X3 404 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 PLXND1Q9Y4D7 1925 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 CSMD1Q96PZ7 3565 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 KNL1Q8NG31 2342 aa2.4□□□□□ -2.03
VAPA-208ENST00000584796 MYO18AQ92614 2054 aaKnown RBP2.4□□□□□ -2.03
VAPA-208ENST00000584796 NBASA2RRP1 2371 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 C2CD3Q4AC94 2353 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 TLN1Q9Y490 2541 aaKnown RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 CROCCQ5TZA2 2017 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 POLQO75417 2590 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CRYBG3Q68DQ2 2970 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 DOCK9Q9BZ29 2069 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 A0A1W2PQF6 199 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 GTPBP10A4D1E9 387 aaKnown RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 OR6C76A6NM76 312 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 ZNF197O14709 1029 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 PLPP2O43688 288 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 KINO60870 393 aaKnown RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 TBCAO75347 108 aaKnown RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 ZNF217O75362 1048 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 SURF6O75683 361 aaKnown RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 GGPS1O95749 300 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 LGALS2P05162 132 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CLEC3BP05452 202 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 ADRB2P07550 413 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 KRTAP1-4P0C5Y4 121 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CSH1P0DML2 217 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CSH2P0DML3 217 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 NR2F1P10589 423 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 LAMP2P13473 410 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 MUTP22033 750 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CBLP22681 906 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CCR10P46092 362 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 STAT2P52630 851 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CD81P60033 236 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 NTHL1P78549 312 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 TFAP4Q01664 338 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms