RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 THOC6Q86W42 341 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 TICAM1Q8IUC6 712 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 MDS2Q8NDY4 140 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 C7orf57Q8NEG2 295 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 SCMH1Q96GD3 660 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 NPLQ9BXD5 320 aaPredicted RBP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 DERL2Q9GZP9 239 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 ABCF3Q9NUQ8 709 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 TRMT1Q9NXH9 659 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 WHRNQ9P202 907 aa13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 PPIEQ9UNP9 301 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-216ENST00000580419 IGKV3D-11A0A0A0MRZ8 115 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 CCDC189A1A4V9 331 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 FAM187AA6NFU0 413 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 TTI1O43156 1089 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 LRRTM2O43300 516 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 RDH16O75452 317 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 SEC24DO94855 1032 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 SLC6A12P48065 614 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 TAS2R50P59544 299 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 GNG11P61952 73 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 ZNF33BQ06732 778 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 CATSPEREQ5SY80 951 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 FAAH2Q6GMR7 532 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 PAPD4Q6PIY7 484 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 LANCL3Q6ZV70 420 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 MAATS1Q7Z4T9 603 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 ADAMTS18Q8TE60 1221 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 UTP15Q8TED0 518 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 PYCR2Q96C36 320 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 TSPAN17Q96FV3 270 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 CFAP36Q96G28 342 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 UTP23Q9BRU9 249 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 RYDENQ9NUL5 291 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 PLA2G3Q9NZ20 509 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 HCN3Q9P1Z3 774 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 ENTPD4Q9Y227 616 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 OSGIN2Q9Y236 505 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 DYRK1BQ9Y463 629 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 MMACHCQ9Y4U1 282 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 KLF2Q9Y5W3 355 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 PSAT1Q9Y617 370 aa13.63□□□□□ -0.23
SMARCE1-216ENST00000580419 ADGRG4Q8IZF6 3080 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 FAM95CA0A1B0GW59 222 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 TCRBV16S1A1N1A0A5B0 115 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 CHST10O43529 356 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 UQCRHP07919 91 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 RNH1P13489 461 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 AGAP20933 346 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 TRHRP34981 398 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 DCTP40126 519 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 SLC26A5P58743 744 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 TAS2R39P59534 338 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 STXBP1P61764 594 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 RBPJQ06330 500 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 PCDH1Q08174 1060 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 HYAL2Q12891 473 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 PDIA2Q13087 525 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 ART3Q13508 389 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 E2F2Q14209 437 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 ADPRMQ3LIE5 342 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 DEFB134Q4QY38 66 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 SFT2D3Q587I9 215 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 ZNF766Q5HY98 468 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 RPTNQ6XPR3 784 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 CCDC91Q7Z6B0 441 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 KLHL7Q8IXQ5 586 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 ANKRD53Q8N9V6 530 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 TMEM178AQ8NBL3 297 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 FBXO36Q8NEA4 188 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 ARMC2Q8NEN0 867 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 ZCCHC10Q8TBK6 192 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 CREB3L4Q8TEY5 395 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 CDKL2Q92772 493 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 RHBDF1Q96CC6 855 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 WDR34Q96EX3 536 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 PEX11GQ96HA9 241 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 CNOT10Q9H9A5 744 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 KCNK13Q9HB14 408 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 PRDM9Q9NQV7 894 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 SLC22A14Q9Y267 594 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 CACNA1CQ13936 2221 aa13.62□□□□□ -0.23
SMARCE1-216ENST00000580419 CROCCQ5TZA2 2017 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 A0A088AWK7 358 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 PRMT3O60678 531 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 H2AFYO75367 372 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 CLEC3AO75596 197 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 GUCA1CO95843 209 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 CELA2AP08217 269 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 C1GALT1C1LP0DN25 315 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 CD46P15529 392 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 ZNF10P21506 573 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 ATP6V0D1P61421 351 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 ACTN3Q08043 901 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 TUBA3CQ13748 450 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 MFSD4BQ5TF39 518 aa13.61□□□□□ -0.23
SMARCE1-216ENST00000580419 TUBA3EQ6PEY2 450 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms