RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ZNF548Q8NEK5 533 aaPredicted RBP4.71□□□□□ -1.66
KARSP3-201ENST00000571212 OR2A12Q8NGT7 310 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 C16orf52Q8NHV5 167 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 WDR36Q8NI36 951 aaKnown RBP4.71□□□□□ -1.66
KARSP3-201ENST00000571212 OSR1Q8TAX0 266 aaPredicted RBP4.71□□□□□ -1.66
KARSP3-201ENST00000571212 ARRDC2Q8TBH0 407 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 ACTL9Q8TC94 416 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 ZNF398Q8TD17 642 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 HCAR2Q8TDS4 363 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 ARRDC3Q96B67 414 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 PPP1R14BQ96C90 147 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 NMD3Q96D46 503 aaKnown RBP4.71□□□□□ -1.66
KARSP3-201ENST00000571212 ECHDC3Q96DC8 303 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 ATXN7L3BQ96GX2 97 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 BMFQ96LC9 184 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 VAT1Q99536 393 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 NAPGQ99747 312 aaPredicted RBP4.71□□□□□ -1.66
KARSP3-201ENST00000571212 FZD3Q9NPG1 666 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 DYRK4Q9NR20 520 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 TMEM184CQ9NVA4 438 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 MGAT4CQ9UBM8 478 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 IPO11Q9UI26 975 aaKnown RBP4.71□□□□□ -1.66
KARSP3-201ENST00000571212 VPS28Q9UK41 221 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 CORO1CQ9ULV4 474 aaPredicted RBP4.71□□□□□ -1.66
KARSP3-201ENST00000571212 R3HDM2Q9Y2K5 976 aaKnown RBP4.71□□□□□ -1.66
KARSP3-201ENST00000571212 PPIL1Q9Y3C6 166 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 CHD5Q8TDI0 1954 aa4.71□□□□□ -1.66
KARSP3-201ENST00000571212 CCDC187A0A096LP49 1063 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 SPTY2D1-AS1A0A0U1RR47 76 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 TSPAN11A1L157 253 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 CPED1A4D0V7 1026 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 POM121BA6NF01 834 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PYCARD-AS1I3L0S3 204 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 SOCS2O14508 198 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 KPNA5O15131 536 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 AQP9O43315 295 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 SMAD6O43541 496 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 RASSF9O75901 435 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 KIAA0754O94854 1291 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 GSRP00390 522 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 MMP2P08253 660 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PRF1P14222 555 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PTPN3P26045 913 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 HSPA9P38646 679 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 MAGEA6P43360 314 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 RABIFP47224 123 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PTDSS1P48651 473 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 NEK3P51956 506 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 TIRAPP58753 221 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 LINC00205P59089 165 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 RPS21P63220 83 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 ZNF91Q05481 1191 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 SLC10A7Q0GE19 358 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 CUL3Q13618 768 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 NAA25Q14CX7 972 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 CDKN3Q16667 212 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 ZNF542PQ5EBM4 170 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 SEL1L3Q68CR1 1132 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 KCTD11Q693B1 232 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 CAPRIN2Q6IMN6 1127 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 KIAA1161Q6NSJ0 714 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 RETSATQ6NUM9 610 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 WDR93Q6P2C0 686 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 GUSBP11Q6P575 273 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 EFL1Q7Z2Z2 1120 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PTAR1Q7Z6K3 402 aaPredicted RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PARGQ86W56 976 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PEX5LQ8IYB4 626 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 CCDC13Q8IYE1 715 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PGBD5Q8N414 524 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PCDH20Q8N6Y1 951 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 TFB1MQ8WVM0 346 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 MAIP1Q8WWC4 291 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 ASB12Q8WXK4 309 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 P3H4Q92791 437 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 NAT6Q93015 286 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PPP1R16AQ96I34 528 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 CELF6Q96J87 481 aaKnown RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 MS4A14Q96JA4 679 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 FEM1CQ96JP0 617 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 TBATAQ96M53 351 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 QKIQ96PU8 341 aaKnown RBP eCLIP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 CCNL2Q96S94 520 aaPredicted RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 HEMGNQ9BXL5 484 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 KRTAP1-5Q9BYS1 174 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 SLC17A9Q9BYT1 436 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 RABL2AQ9UBK7 228 aaPredicted RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 LHX3Q9UBR4 397 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 IL36AQ9UHA7 158 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 IL17BQ9UHF5 180 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 PCYOX1Q9UHG3 505 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 CDC23Q9UJX2 597 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 DNPEPQ9ULA0 475 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 TMED5Q9Y3A6 229 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 HEMK1Q9Y5R4 338 aaPredicted RBP4.7□□□□□ -1.66
KARSP3-201ENST00000571212 LRRK1Q38SD2 2015 aa4.7□□□□□ -1.66
KARSP3-201ENST00000571212 LOC285095A0A1B0GVY8 99 aa4.69□□□□□ -1.66
KARSP3-201ENST00000571212 F8W8V4 182 aa4.69□□□□□ -1.66
KARSP3-201ENST00000571212 TMX2-CTNND1H3BSU7 103 aa4.69□□□□□ -1.66
KARSP3-201ENST00000571212 CCDC188H7C350 402 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms