RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SH3BP4Q9P0V3 963 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 MGAT4CQ9UBM8 478 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 TUBD1Q9UJT1 453 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 LHX6Q9UPM6 363 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 SAMHD1Q9Y3Z3 626 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 CH25HO95992 272 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 TMPRSS3P57727 454 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 SNTB2Q13425 540 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 CST6Q15828 149 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 LRRC38Q5VT99 294 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 AMZ2Q86W34 360 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ZNF276Q8N554 614 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 FAM160A2Q8N612 972 aaPredicted RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 DEFB124Q8NES8 71 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 RASSF5Q8WWW0 418 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 UBL7Q96S82 380 aaPredicted RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 C7orf50Q9BRJ6 194 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 FEM1AQ9BSK4 669 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 IL21RQ9HBE5 538 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 ZCCHC3Q9NUD5 404 aaKnown RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 GIMAP4Q9NUV9 329 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 CACNA2D2Q9NY47 1150 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 DLGAP2Q9P1A6 1054 aa6.42□□□□□ -1.38
SMG1-217ENST00000569764 KLHL8Q9P2G9 620 aaPredicted RBP6.42□□□□□ -1.38
SMG1-217ENST00000569764 CCDC187A0A096LP49 1063 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 ILVBLA1L0T0 632 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 DCDC2BA2VCK2 349 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 WASHC1A8K0Z3 465 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 WASH3PC4AMC7 463 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 PIK3R2O00459 728 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 PTGESO14684 152 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 EREGO14944 169 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 RASSF9O75901 435 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CCNB2O95067 398 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 SAT1P21673 171 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 AKR1D1P51857 326 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 MAT1AQ00266 395 aaKnown RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 SLC6A3Q01959 620 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CKAP4Q07065 602 aaKnown RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 ATP1A4Q13733 1029 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 PDK2Q15119 407 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 PIP5KL1Q5T9C9 394 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 MARC1Q5VT66 337 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 TRNP1Q6NT89 227 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 DENND1BQ6P3S1 775 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 WASH2PQ6VEQ5 465 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 RBM44Q6ZP01 1051 aaKnown RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 PIM3Q86V86 326 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 TMEFF1Q8IYR6 380 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CYP4X1Q8N118 509 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 FBXO39Q8N4B4 442 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 HTR3CQ8WXA8 447 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 RLN3Q8WXF3 142 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 ATG4AQ8WYN0 398 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 LURAP1Q96LR2 239 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 ZNF285Q96NJ3 590 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 ZNF416Q9BWM5 594 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CLPBQ9H078 707 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 MARCH7Q9H992 704 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 HHATLQ9HCP6 504 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 RAB9BQ9NP90 201 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 SAYSD1Q9NPB0 183 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 HCFC1R1Q9NWW0 138 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 MLXQ9UH92 298 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 SLC24A2Q9UI40 661 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 NEUROG3Q9Y4Z2 214 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 SLC31A1O15431 190 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 HRGP04196 525 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 GSTM1P09488 218 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 AZGP1P25311 298 aaKnown RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 DLSTP36957 453 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 TP53BP2Q13625 1128 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 TRIP13Q15645 432 aaPredicted RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 CDO1Q16878 200 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 FAM83EQ2M2I3 478 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CARD16Q5EG05 197 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 TTC33Q6PID6 262 aaPredicted RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 PAOXQ6QHF9 649 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 SCIMPQ6UWF3 145 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 LCLAT1Q6UWP7 414 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CAMKMTQ7Z624 323 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 ZSWIM9Q86XI8 627 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 PLXDC1Q8IUK5 500 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 DCAF4L2Q8NA75 395 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 SCAMP5Q8TAC9 235 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CMTM5Q96DZ9 223 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 WDR92Q96MX6 357 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 GAL3ST4Q96RP7 486 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 VRK1Q99986 396 aaPredicted RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 EPB41L4BQ9H329 900 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CAB39LQ9H9S4 337 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 RAB6BQ9NRW1 208 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 AGPAT4Q9NRZ5 378 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 SAE1Q9UBE0 346 aaPredicted RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 B4GALT6Q9UBX8 382 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 AMFRQ9UKV5 643 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 SLC12A4Q9UP95 1085 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 RAD54BQ9Y620 910 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CHD9Q3L8U1 2897 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms