RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CCDC59Q9P031 241 aaKnown RBP19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TRPS1Q9UHF7 1281 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CD84Q9UIB8 345 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 RIMKLBQ9ULI2 386 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 MAP4K5Q9Y4K4 846 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PCDHGA2Q9Y5H1 932 aa19.73■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CENPBD1B2RD01 187 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PLD2O14939 933 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 KDELR3O43731 214 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CDRT1O95170 752 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 AMD1P17707 334 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SLC38A6Q8IZM9 456 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 RBFAQ8N0V3 343 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DIRAS2Q96HU8 199 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 MS4A4AQ96JQ5 239 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SLC32A1Q9H598 525 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ZNF556Q9HAH1 456 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 A0A0G2JMP0 313 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GCM2O75603 506 aaPredicted RBP19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CYP17A1P05093 508 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SDHBP21912 280 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 IER5LQ5T953 404 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 RSPO2Q6UXX9 243 aaPredicted RBP19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 OR9Q1Q8NGQ5 310 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 FATE1Q969F0 183 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 FAM129BQ96TA1 746 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PKP4Q99569 1192 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 C12orf71A8MTZ7 269 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 HOXB9P17482 250 aaPredicted RBP19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PYDC2Q56P42 97 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ZNF467Q7Z7K2 595 aaPredicted RBP19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ATCAYQ86WG3 371 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 AQP11Q8NBQ7 271 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TMCO6Q96DC7 493 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DKK3Q9UBP4 350 aa19.72■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GNG14A0A1W2PPG7 69 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GAPDHSO14556 408 aaPredicted RBP19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SMAD6O43541 496 aaKnown RBP19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ENTPD6O75354 484 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CD160O95971 181 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 MYCP01106 439 aaPredicted RBP19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PRPS2P11908 318 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SRCP12931 536 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GPX2P18283 190 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 VEPH1Q14D04 833 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TTLL9Q3SXZ7 439 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 NFKBIDQ8NI38 313 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 PCNPQ8WW12 178 aaKnown RBP19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 MED8Q96G25 268 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 FAM193BQ96PV7 902 aaPredicted RBP19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DUSP26Q9BV47 211 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TEKT2Q9UIF3 430 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 V9GYH0 126 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 A0A0B4J293 547 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TBKBP1A7MCY6 615 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GABRR3A8MPY1 467 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 RUNX1T1Q06455 604 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 COL9A2Q14055 689 aaPredicted RBP19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TTC23LQ6PF05 361 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ZNF557Q8N988 423 aaPredicted RBP19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 OR5H6Q8NGV6 325 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SLC7A6Q92536 515 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 RNF31Q96EP0 1072 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DOHHQ9BU89 302 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 RAB23Q9ULC3 237 aa19.71■□□□□ 0.75
MAP1LC3B-206ENST00000564844 A0A0U1RQF3 1178 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 TMEM229AB2RXF0 380 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 TPST2O60704 377 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SCN2BO60939 215 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CRYZL1O95825 349 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SEMG1P04279 462 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ITGALP20701 1170 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 MYL9P24844 172 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 TIE1P35590 1138 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 GPAT3Q53EU6 434 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 GPRC6AQ5T6X5 926 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 FRG2Q64ET8 278 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 C8orf48Q96LL4 319 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 FRG2BQ96QU4 278 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HHATLQ9HCP6 504 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PCDHB1Q9Y5F3 818 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CKAP5Q14008 2032 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 MYO7AQ13402 2215 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SCO1O75880 301 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 IL1RNP18510 177 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CORO1AP31146 461 aaKnown RBP19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CCR7P32248 378 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HMGCLP35914 325 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 NFE2Q16621 373 aaPredicted RBP19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PDZK1Q5T2W1 519 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HMGN2P46Q86SG4 172 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 MEX3DQ86XN8 651 aaKnown RBP19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SYT14Q8NB59 555 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 AP3M1Q9Y2T2 418 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 H3BN98 237 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 H3BNC9 293 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ETHE1O95571 254 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 GASTP01350 101 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 BPIP17213 487 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PRIM2P49643 509 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms