RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 LDLRP01130 860 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 FHP07954 510 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 GDF5P43026 501 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 OR4D2P58180 307 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 RHAGQ02094 409 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 SRSF11Q05519 484 aaKnown RBP16.65■□□□□ 0.26
NME3-205ENST00000563854 USP10Q14694 798 aaKnown RBP16.65■□□□□ 0.26
NME3-205ENST00000563854 TOR1AIP1Q5JTV8 583 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 CTAGE6Q86UF2 777 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 CCDC25Q86WR0 208 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 CYP4X1Q8N118 509 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 AFAP1L2Q8N4X5 818 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 ANKRD53Q8N9V6 530 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 CCT6BQ92526 530 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 TBC1D20Q96BZ9 403 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 OR1F2PQ96R84 312 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 SARGQ9BW04 601 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 LANCL2Q9NS86 450 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 STMN3Q9NZ72 180 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 WHRNQ9P202 907 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 CPAMD8Q8IZJ3 1885 aa16.65■□□□□ 0.26
NME3-205ENST00000563854 OR5H15A6NDH6 313 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 JAK1P23458 1154 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 AHRP35869 848 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 HNMTP50135 292 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 CDKL1Q00532 357 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 POU4F1Q01851 419 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 EXT1Q16394 746 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 FBXO48Q5FWF7 155 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 RPUSD3Q6P087 351 aaKnown RBP16.64■□□□□ 0.25
NME3-205ENST00000563854 CTAGE3PQ8IX95 158 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 BEST3Q8N1M1 668 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 TRPV3Q8NET8 790 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 UTP15Q8TED0 518 aaKnown RBP16.64■□□□□ 0.25
NME3-205ENST00000563854 ANKRD7Q92527 254 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 EXT2Q93063 718 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 TSPAN17Q96FV3 270 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 TAAR6Q96RI8 345 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 LPAR4Q99677 370 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 POPDC3Q9HBV1 291 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 PRM3Q9NNZ6 103 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 ANKRD10Q9NXR5 420 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 WWOXQ9NZC7 414 aa16.64■□□□□ 0.25
NME3-205ENST00000563854 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.64■□□□□ 0.25
NME3-205ENST00000563854 ICE1Q9Y2F5 2266 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 URADA6NGE7 173 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 MAGEB17A8MXT2 336 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 PSMD12O00232 456 aaPredicted RBP16.63■□□□□ 0.25
NME3-205ENST00000563854 LRRTM2O43300 516 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 CCDC166P0CW27 439 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 IL10P22301 178 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 SLBPQ14493 270 aaKnown RBP eCLIP16.63■□□□□ 0.25
NME3-205ENST00000563854 INAQ16352 499 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 ACER2Q5QJU3 275 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 NIPAL1Q6NVV3 410 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 SYT10Q6XYQ8 523 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.63■□□□□ 0.25
NME3-205ENST00000563854 RHBDF1Q96CC6 855 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 ZNF354BQ96LW1 612 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 SLX1AQ9BQ83 275 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 SLC6A16Q9GZN6 736 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 DERL2Q9GZP9 239 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 RNF32Q9H0A6 362 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 KLHL31Q9H511 634 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 GRHL1Q9NZI5 618 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 ABI3Q9P2A4 366 aa16.63■□□□□ 0.25
NME3-205ENST00000563854 UTP11Q9Y3A2 253 aaKnown RBP16.63■□□□□ 0.25
NME3-205ENST00000563854 SPTBN1Q01082 2364 aaKnown RBP16.63■□□□□ 0.25
NME3-205ENST00000563854 HIVEP3Q5T1R4 2406 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 CNTRLQ7Z7A1 2325 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 A0A0G2JN53 185 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 TCRBV9S1A1TA0A576 114 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.25
NME3-205ENST00000563854 PRAMEF2O60811 474 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 H2AFYO75367 372 aaKnown RBP16.62■□□□□ 0.25
NME3-205ENST00000563854 RASAL1O95294 804 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 CLDN1O95832 211 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 C1GALT1C1LP0DN25 315 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 GNAZP19086 355 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 COL8A1P27658 744 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 PLTPP55058 493 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 KCNK10P57789 538 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 PMP22Q01453 160 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 TGFBIQ15582 683 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 C3orf62Q6ZUJ4 267 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 MAMDC2Q7Z304 686 aaPredicted RBP16.62■□□□□ 0.25
NME3-205ENST00000563854 GPSM1Q86YR5 675 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 CRLF3Q8IUI8 442 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 SNX31Q8N9S9 440 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 PLPP5Q8NEB5 264 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 M1APQ8TC57 530 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 NR4A3Q92570 626 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 PTCHD1Q96NR3 888 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 RBBP8Q99708 897 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 CPNE1Q99829 537 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 MCMBPQ9BTE3 642 aa16.62■□□□□ 0.25
NME3-205ENST00000563854 A8MUA0 341 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 C4orf51C9J302 202 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 PRMT3O60678 531 aa16.61■□□□□ 0.25
NME3-205ENST00000563854 MYBL2P10244 700 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms