RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SDC4P31431 198 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 CETN1Q12798 172 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 PTK6Q13882 451 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 RNF187Q5TA31 235 aaPredicted RBP9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 ISM2Q6H9L7 571 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 ZNF474Q6S9Z5 364 aaPredicted RBP9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 HSCBQ8IWL3 235 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 HM13Q8TCT9 377 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 NELFBQ8WX92 580 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 GTF3AQ92664 365 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 SMARCE1Q969G3 411 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 INTS12Q96CB8 462 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 TM9SF2Q99805 663 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 DEFB126Q9BYW3 111 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 CDC42EP4Q9H3Q1 356 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 HPF1Q9NWY4 346 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 TUBA8Q9NY65 449 aaPredicted RBP9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 CAMK2AQ9UQM7 478 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 RNF115Q9Y4L5 304 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 PCDHGB5Q9Y5G0 923 aa9.67□□□□□ -0.86
HDGFL3-204ENST00000563790 TARM1B6A8C7 271 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 CCP110O43303 1012 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 EIF2S1P05198 315 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 ERVK-10P10266 1014 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 DNASE1L1P49184 302 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 SSR4P51571 173 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 GAB1Q13480 694 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 TYSND1Q2T9J0 566 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 ZNF672Q499Z4 452 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 C2CD6Q53TS8 623 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 CASC10Q5T4H9 136 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 ALG1LQ6GMV1 187 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 KLHL10Q6JEL2 608 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 PCGF5Q86SE9 256 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 SYT14Q8NB59 555 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 FAM172AQ8WUF8 416 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 MAML1Q92585 1016 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 TFGQ92734 400 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 ZUFSPQ96AP4 578 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 TIGD1Q96MW7 591 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 CITED1Q99966 193 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 SLC39A3Q9BRY0 314 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 AARSD1Q9BTE6 412 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 NTMT1Q9BV86 223 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 DDX28Q9NUL7 540 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 QPCTLQ9NXS2 382 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 RNF112Q9ULX5 631 aa9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.66□□□□□ -0.86
HDGFL3-204ENST00000563790 CFAP99D6REC4 459 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 PDE5AO76074 875 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 SMC2O95347 1197 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 PON1P27169 355 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 PCK1P35558 622 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 SLCO1A2P46721 670 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 TRPC1P48995 793 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 STX17P56962 302 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 KCNJ2P63252 427 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 DUSP8Q13202 625 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 ABRAXAS2Q15018 415 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 NSDHLQ15738 373 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 BCL7AQ4VC05 210 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 KLHL22Q53GT1 634 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 MARC1Q5VT66 337 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 ANKRD34AQ69YU3 496 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 FAM47EQ6ZV65 393 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 FAM71AQ8IYT1 594 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 GCNT2Q8N0V5 402 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 OR5AR1Q8NGP9 310 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 ZCCHC10Q8TBK6 192 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 WFDC12Q8WWY7 111 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 NEUROG1Q92886 237 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 SERINC2Q96SA4 455 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 POLR1EQ9GZS1 481 aaKnown RBP9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 DRC3Q9H069 523 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 NT5MQ9NPB1 228 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 SEMA4BQ9NPR2 832 aaPredicted RBP9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 METTL5Q9NRN9 209 aaKnown RBP9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 FZD10Q9ULW2 581 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 SHOC2Q9UQ13 582 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 CTNND2Q9UQB3 1225 aa9.65□□□□□ -0.86
HDGFL3-204ENST00000563790 A0A0A6YYC8 382 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 A0A0J9YVX5 310 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 SLC22A31A6NKX4 558 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 C2CD4BA6NLJ0 364 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 I3L1I5 382 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 NDUFS8O00217 210 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 MAFKO60675 156 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 SMNDC1O75940 238 aaKnown RBP eCLIP9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 GNA14O95837 355 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 SLC4A1P02730 911 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 RFPL3SP0C7P2 107 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 PPP3CBP16298 524 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 DVL1P1P54792 670 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 OR4D2P58180 307 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 RCAN2Q14206 197 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 RAB35Q15286 201 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 NXPE4Q6UWF7 544 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 RNF44Q7L0R7 432 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 DET1Q7L5Y6 550 aa9.64□□□□□ -0.87
HDGFL3-204ENST00000563790 LRRC25Q8N386 305 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms